| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0249 |
|---|
| Symbol | |
|---|
| ID | 9154384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 260842 |
|---|
| End bp | 261657 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Abortive infection protein |
|---|
| Protein accession | YP_003645238 |
|---|
| Protein GI | 296137995 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACG ACAGCACCAG TCCCGCGGGC GGTAACGCGG CAGACGAACG GCCACGGCGT
CGGCCCTGGT GGCAGCTTTA CGAGGCGAAC AGCCTGGTCG GGCTTGCCTT CGCTGGCATG
CTCTGGGTGG TCGCGTTTTC GGCGTACCTG ATGGCTCCTC AGGACGACTA CCAAGTCGGT
CAGGCATCTG CCCCGGCGGT CATAGGGTTC CTCATCCTGG GCTTGATCGT GGTGGCCCTT
GTCGTGGGCA TCACGATCAT GTTTGGCGCG TCCGTGCGCG AGGTGCGGCG GCGGCTCGGG
TTCACGCGTC CGCGGGGCCG CGCGGGATGG CGCTGGGCAT GGATCCTGGT CGCTATCGGC
CTGGGGATCG TGATCCGCAT GGAGCTCGTT CCCGCCATTG GAGATCTGTG GCCCAGCATC
AAGATCCAGA GCGATGCGCA GAGGGCGGCC GATGATCTCC GAGATCTCCA GCTGGCCGCC
CCGGCGTGGA TGGTCTGGAC TCACGCCGCG GGCGAGGAAC TGATATTTCG ATGCCCGGTC
GTCGCCGCGG CTGTGTGGGC TTTCGGTGAC GGGCCTCTGC GTTGGCGTCA GGTGCCGCGC
GTGTGCGTCG CTGTGGTCGC CGCCGTGGTG GCGGTGACGT CTGTTCTGTT TGGGCTCGCA
CACGTCGAGT TCAGCTGGTA CAACGTGGCC GCTGCCGGCG TGATGGGACT CGCCTGCGCA
GTCGTCGCAG TCGTCACCCG GTCGATCTGG CCCGCGGCCG CCTTACACGC CGCATACAAC
ACGTTCTCGA TCGCTTCGAT GACGCGGCTC TGGTGA
|
|---|
| Protein sequence | MTDDSTSPAG GNAADERPRR RPWWQLYEAN SLVGLAFAGM LWVVAFSAYL MAPQDDYQVG
QASAPAVIGF LILGLIVVAL VVGITIMFGA SVREVRRRLG FTRPRGRAGW RWAWILVAIG
LGIVIRMELV PAIGDLWPSI KIQSDAQRAA DDLRDLQLAA PAWMVWTHAA GEELIFRCPV
VAAAVWAFGD GPLRWRQVPR VCVAVVAAVV AVTSVLFGLA HVEFSWYNVA AAGVMGLACA
VVAVVTRSIW PAAALHAAYN TFSIASMTRL W
|
|---|
| |