Gene Tpau_0175 details

Gene Information

• Locus tag: Tpau_0175
• ID: 9154309
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 182483
• End bp: 187597
• Gene Length: 5115 bp
• Protein Length: 1704 aa
• Translation table: 11
• GC content: 68%
• Product: Beta-ketoacyl synthase
• Protein accession: YP_003645168
• Protein GI: 296137925

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAGA ACGAGTACAC CCCCCATGAA GGCCCGACCG GCAAGGCCCG TGAGGATCTG 
AGCCTCGAGG AACTGCGCGC GTGGATGCGG CAGTGGATCG CGGACGCCAC CAAGCAGCCC 
GTCGAGAACA TCACCGATGA CAAGTCGCTC GACGAGTTCG GCCTGGGCTC GCGCGACGCG 
GTCTCCATGG CGTCGGACAT CGAGGATTTC ACCGGCGTCC AGCTGACGGC CACCGTCGCC 
TTCCAGCATC CGACGATCGC CCTGCTCAGT CAGCGCATCA TCGACGGTGA CCCGGTGGTC 
TCCGACGACG ATCTCGCCGC CGAGGCGGCG CAGTACGACC GTGGCGAGGA GTTCGAGGCG 
AACCGCGGAA CGCACGACGT GGCCGTGGTC GGTCTCGCGA CGCGCTTCCC CAAGGCGGGG 
GAGACCCCCG AGTCCACGTG GGAGTTCCTC ATCGGGAACG GCGACGCCAC CACCGATCTG 
CCCGAGGACC GCTGGCTGGA GTTCAAGCAG GACCCGCGCC TGAAGGCCGT ACTCGACGAG 
GCCAACACGT TCGGCGGCTA CCTCGACGAC GTGGCCTCCT TCGACGCCGA GTTCTTCCAG 
ATGACCCCGC GTGAGGTCGA GATGGTCGAT CCGCAGCAGC GGCTCGCGCT CGAACTCACC 
TGGGAGGCGC TGGAGCAGGC CAACATTCCG CCCAGCTCCG TCAAGGGCAC CCGCACCGGT 
GTGTGGATGG GCAGCTCCGC CAACGACTAC CAGATGCTGG CCGTGGCCGA CCCGACGAAG 
GCCAATCCGT ACGCGCTGAC CGGCACGTCG ACCTCCATCG TCGCAAACCG CGTCTCCTAC 
TTCTACGATT TCCACGGCCC GTCGGTCGCG GTCGACACCG CGTGCTCGTC CTCGCTGGTG 
GCGATCCACC AGGCCATCCG CAGCCTGCGC GACGGCGAGA CCGATATGGC CGTCGCCGGC 
GGTGTGAACA TGCTCATCGT GCCCGCCGCG ACGCTGGGCT TCGACAGCCT CGGCGCGCAG 
GCGCCCGACG GCAAGATCAA GGCCTTCAGC TCGGACGCCA ACGGCATGAT CCGCGCTGAG 
GGCGGCGGCG TCGTGCTGCT CAAGCGGCTC GCCGACGCCG AGCGCGACGG CGACGACATC 
CTCGGTGTGA TCGCCGGCTC CGCCGTCACC TCCGATGGCA AGTCCAACGG CATCTTCGCG 
CCGAACCCGG AGGCGCAGGT GATCAACCTG CGCGACGCCT ACATCGACGC CGGTATCGAC 
CCGCGCACCG TGGATTACCT CGAGGCGCAC GGCACCGGCA CCATCCTGGG CGATCCGCTC 
GAGGCCGACG CCATCGGCCG CGTTCTCGGC CGCGGCCGCG ACGCCGAGAA GCCGCTGTTG 
CTCGGTTCGG CGAAGACCAA CTTCGGCCAC CTGGAGGCGG CCGCGGGTAT CGCCGGCGTC 
GCCAAGGTGC TGCTCTCGAT CCGCAACGGC CAGATCCCCG CCTCGCTGAA TTTCGCCGGC 
CCCAACCCGT ACATCCAGTT CGAGGCCAAT CGCCTCCTGA TGGCGGCGCG GAACACCGAG 
TGGCCCCGGT ACTCCGGCCA CCGGATCGCC GGCGTCACGG GTAACGGTTT CGGCGGCACC 
AACGCCCACG TGGTCATCAC GGAGTACATC GCTCCCGAGA TCGTCGAGGG CGAAACCGAA 
GCGGACGCTG CGGATTCCGC GGACCCGAAT GCGGTGCCGG AGTTCTACGC GGCCACCGCC 
GACGGTGTCG CGGTCCCGCT CGTGCTCACC GCCTACGTCC CGTCGCGCCG CCGCGCGGCC 
GCCGCTGAGC TCCTCGAATG GCTGGAGTCC GACGAGGCCA CGCAGTATTC GCTGGCCGAG 
ATCGGTCGTA CCCTCGCCAG TCGCAACCAC GGCCGTGTCC GTTCGGTGGT CCTGGCCAAG 
GATCTCGACG AGGCGATCAA GGGATTCCGC GCGATCGCCG AGGGCAAGAA CGCGCCGAAC 
GTGATCTCCG CCAACCAGCC GGACGCGACC GGTCCGGCGT TCATCTTTTC CGGTTTCGGC 
AGCCATCACC GCAAGATGGC CAAGCAGCTC TACCTCGAGA ACCCCGTGTT CAAGCACTAC 
TTCGACGAGG TCAACGAGCT GATCATCGAC GAGTCGGGCG ACGACTACGC CGAGATGATC 
ACCGACGACG CGCAGACCTT CCACATCGAG ACCGGCCAGG TGGGCATCTT CGCCATCCAG 
GTCGCACTCG TGGGCCTGTT CCGCCATCAC GGCATCGAAC CCGGTGTGGT GCTGCCGCAT 
TCGATGGGCG AGGCCACCGC GGCCTGGCTC ACCGGCGGCC TCTCGCTGGA AGACGCCGTG 
CGCGTCATCT GCAACCGCTC GCGCCTGATG GGCGAGGGCG AGGCCATGCT CCCCGAGGAG 
ATGGAACGAT TCATGGCGCT GGTGGAGTAC AGCGCCGACG ACATCGACAC CGTGCTGGGC 
GAGTACGAGG GCCTGGAGAT CTGCGTCTAC GCCGCGCCCA CGCACACTGT GATCGGCGGC 
CCCGGCAAGG TGATCGACCA GATCGTCGCC GAGACCGAGG CCAAGGGCCT CATGGCTCGC 
AAGCTCGTCA CCCGCGGTGC CTCGCACACC TCGCAGATGG ACCCGCTGCT CGGCGAACTG 
CAGGCCGAGC TCATGGGTAT CGAGCCGCAC CCGCTGAAGT ACCCGATGTA TTCCACCGTG 
AACAAGGAGG AGTTCTATCG TGCGGGGCAC GCCCCGGTGC ACGATGTGGA CTACTGGATC 
AAGGGCCTGC GCCACAGTGT CTGGTTCACC CAGGCCGTGG AGAAGGCCGT CGAGGCCGGC 
TACCGCACCT TCATCGAGTT CTCCCCGAAC CCGATCACCC TGATCTCCGT GGCCGCGGTG 
ACGTTCGGCT CCGGTATCCA GGACGCCGCG CTGGTGCAGA CGCTCAAGCG CAAGGAGGAC 
GAGCCCGGCA CGATCATGAC CGCGCTCGCC ACCGTCTTCG CACACGGCCA CCACGTGGAC 
GTCGCCTCGC TCTTCGGCCC CGGCCGGTAC GCACCCGTGC CGCGGACGAA GTTCCAGCGC 
AAGCACATCT GGATCCAGAC CAAGCTGCCC GACGGCGGCT CGGGCATGGT TCCCGGCGCG 
CATGTGGCGC TGCCCGACGG CCGGCACGTG TGGCAGCTCG ATGCGGGCGC GCTCACCCTG 
GGCGATCAGA CGCGGATCTC GCTGGTCGAC CTCGCGAAGA ATGCCGCCGT CCAGGTACTC 
GACGGTGCCG CGGTCACCGC GGCGGTCGAG CACGGCGAGG CCGCGGACGG GAACACCCTG 
ACCACCACGC TGACCCCGCA CCCGGGCGGC GCATCGATCC AGGTGCACGA GAACACCGGC 
ACGGGCTTCC GGCTGCTGCT CGACGCCGTC GTGGTGGGCG GCGAGGCCTC CGGCAGCGCC 
GCGGCGCCGC TCATCACCAA GGCCGCGCCC GCCGCGATCG CGGACGATGC CGACGACGCG 
CTCGACGCCG AGCCCGCGAT CGCCGTCTCC GAGGAGACCG AGGCCCCCGC CCCCGAGGGC 
AGCAGCACCG AGCGCTGGTC GCCCGAGTCC GGGGAGACCG TCGAGCACCG CCTCGGCGTG 
ATCATCGCCG AGACCATGGG ATTCGAGATC GAAGACCTCC CCAAGGAGAT CCCGCTCATC 
GACCTCGGCA TGGACTCGCT GATCGCCATG CGCATCAAGA ACCGCGCCGA GTACGAGTTC 
GACATCCCGC CGATCCAGAT CCAGGCGGTG CGCGATGCAT CGTTCAACGA TGTGGTGCAG 
TTCGTGGAGT ACGCGGTGGA GCACCGTGAC CAGGTCGACG CGCTGGCCGA GCACCAGTCC 
GGCACCGGTG AGATGGCCGA TGCCGGCAAG CTCGCCGAGA TGATGCAGGC CGCGAAGGAC 
GAGGCCGCCG CCAAGGCGTC CGCGCCGGAG AGCGCACCGG AGTCCGAGCC TGCCGCACCG 
TCGGAACCCG AAACCGGCAG CGACGCACCC GATCTGCTCG ACGGAGCCGC CGTCGCGGAG 
GCCATCGGCG ACGGTGTGCC CCCGCGCGAC GCGGCCGAGC GCCTCACCTT CGCGACCTAC 
GCGATCGTCG TGGGCCGCTC GCCCGGCGGC GTGTTCAACG AGCTCGATGT GCTGAGCGAG 
GACGTCGCGG AGAAGCTCAC CGCGCGACTG TCCGAGCGGG CCGGCGGCGA GGTGGACATC 
GAGGACGTCA TCGACTCGAA GAACATCGAG GAGATGGCCA CCTACGTGGG CGCCGTGATG 
AACGAGGCCA CCCCGGTGGA CGGATTCGTC CGCACCCTGC GCAAGCCGGA GAACACGAAT 
CGCAAGCCGC TCTTCCTGTT CCACCCCGCC GGCGGCAATA CCACCGCCTA CGAGGCACTG 
CTGCGCAAGC TGCCGCAGGA TCTGCCGGTC TACGGATTCG AGCGGGTCGA GGGCGAGGTC 
GAGGACCGGG TGCGCGAGTA CCTGCCCAAG CTCAAGCAGA TCCAGCCCGA GGGGCCGTAC 
CGGCTCGCGG GCTGGAGCCT CGGCGGCGCC TTCGCCTACG GGCTCGGCCG CGCCCTGGAG 
GACGAGGGCC AGCAGGTGGA GTACATCGGC CTGCTGGACG TGGTGGCCCC GACGGTCCCG 
CTCACCGACG AGCCCGCCGA GAAGAAGGCC CGCCTGCAGC GCTGGGAAAC CTTCGCCCGC 
AAGAACTACG ACATCGGCAG CGAGATCGAA CTCCCGATGG ACCGGCTCGA AGCGGCGGAC 
GACGAGGGCC AGTTCAAGAT CATCATGGAA CTGGTGCAGC TCTCCGATAA GAAGGTGCCC 
ACCTCGATGA TCGAGCACCA GCGCACGTCG TTCATCGACA ACCGCATGCT GATCAAGGTG 
AACCCCGCCG ACTACGGCCG GTTCGAGGGC AAGGTCACGC TGTACCGCGC CGACCGCATG 
CACGACGGTG CGGTCGAGCT GGAGCCGAAC TTCGCGGACA TCGCGCCGGA CGGCGGCTGG 
GCGCCCGTGG TGGAAGACCT GGAGATCGTG AAGATCGGCG GCGATCACCT GCAGATCATC 
GACGAGCCGT ACATCGGAAA GATCGCCACG CACATGTCGG CCGAGCTCGA ACGAGCCGAC 
GCCGAGCGGT CCTGA 

 

Protein sequence

MAENEYTPHE GPTGKAREDL SLEELRAWMR QWIADATKQP VENITDDKSL DEFGLGSRDA 
VSMASDIEDF TGVQLTATVA FQHPTIALLS QRIIDGDPVV SDDDLAAEAA QYDRGEEFEA 
NRGTHDVAVV GLATRFPKAG ETPESTWEFL IGNGDATTDL PEDRWLEFKQ DPRLKAVLDE 
ANTFGGYLDD VASFDAEFFQ MTPREVEMVD PQQRLALELT WEALEQANIP PSSVKGTRTG 
VWMGSSANDY QMLAVADPTK ANPYALTGTS TSIVANRVSY FYDFHGPSVA VDTACSSSLV 
AIHQAIRSLR DGETDMAVAG GVNMLIVPAA TLGFDSLGAQ APDGKIKAFS SDANGMIRAE 
GGGVVLLKRL ADAERDGDDI LGVIAGSAVT SDGKSNGIFA PNPEAQVINL RDAYIDAGID 
PRTVDYLEAH GTGTILGDPL EADAIGRVLG RGRDAEKPLL LGSAKTNFGH LEAAAGIAGV 
AKVLLSIRNG QIPASLNFAG PNPYIQFEAN RLLMAARNTE WPRYSGHRIA GVTGNGFGGT 
NAHVVITEYI APEIVEGETE ADAADSADPN AVPEFYAATA DGVAVPLVLT AYVPSRRRAA 
AAELLEWLES DEATQYSLAE IGRTLASRNH GRVRSVVLAK DLDEAIKGFR AIAEGKNAPN 
VISANQPDAT GPAFIFSGFG SHHRKMAKQL YLENPVFKHY FDEVNELIID ESGDDYAEMI 
TDDAQTFHIE TGQVGIFAIQ VALVGLFRHH GIEPGVVLPH SMGEATAAWL TGGLSLEDAV 
RVICNRSRLM GEGEAMLPEE MERFMALVEY SADDIDTVLG EYEGLEICVY AAPTHTVIGG 
PGKVIDQIVA ETEAKGLMAR KLVTRGASHT SQMDPLLGEL QAELMGIEPH PLKYPMYSTV 
NKEEFYRAGH APVHDVDYWI KGLRHSVWFT QAVEKAVEAG YRTFIEFSPN PITLISVAAV 
TFGSGIQDAA LVQTLKRKED EPGTIMTALA TVFAHGHHVD VASLFGPGRY APVPRTKFQR 
KHIWIQTKLP DGGSGMVPGA HVALPDGRHV WQLDAGALTL GDQTRISLVD LAKNAAVQVL 
DGAAVTAAVE HGEAADGNTL TTTLTPHPGG ASIQVHENTG TGFRLLLDAV VVGGEASGSA 
AAPLITKAAP AAIADDADDA LDAEPAIAVS EETEAPAPEG SSTERWSPES GETVEHRLGV 
IIAETMGFEI EDLPKEIPLI DLGMDSLIAM RIKNRAEYEF DIPPIQIQAV RDASFNDVVQ 
FVEYAVEHRD QVDALAEHQS GTGEMADAGK LAEMMQAAKD EAAAKASAPE SAPESEPAAP 
SEPETGSDAP DLLDGAAVAE AIGDGVPPRD AAERLTFATY AIVVGRSPGG VFNELDVLSE 
DVAEKLTARL SERAGGEVDI EDVIDSKNIE EMATYVGAVM NEATPVDGFV RTLRKPENTN 
RKPLFLFHPA GGNTTAYEAL LRKLPQDLPV YGFERVEGEV EDRVREYLPK LKQIQPEGPY 
RLAGWSLGGA FAYGLGRALE DEGQQVEYIG LLDVVAPTVP LTDEPAEKKA RLQRWETFAR 
KNYDIGSEIE LPMDRLEAAD DEGQFKIIME LVQLSDKKVP TSMIEHQRTS FIDNRMLIKV 
NPADYGRFEG KVTLYRADRM HDGAVELEPN FADIAPDGGW APVVEDLEIV KIGGDHLQII 
DEPYIGKIAT HMSAELERAD AERS