Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0095 |
Symbol | |
ID | 9154229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 100379 |
End bp | 102559 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Carbonate dehydratase |
Protein accession | YP_003645088 |
Protein GI | 296137845 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.431657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAGTT CGATCCGTGA GGGAGTCGTC GTGCAGGAGA AGTTAAGAGA GGTGGTGCGT TTCGACGTAC CGGCCTCGAT CGTGGTGTTC TTGGTAGCGC TTCCGCTATC ACTGGGCATC GCGCTCGCAT CGGGGGCACC GCTCATGGCG GGTCTCATCG CCGGTGTCAT CGGTGGCATC GTCGGCGGCC TCATGGGAGG CTCGCCGCTG CTGGTCAGCG GTCCTGCAGC CGGATTGACC GTGGTGGTCG CGGAGCTGAT CAACAAGTTC GGCTGGAAGG TGACCGCCGC GATCACCGTG GCGGCCGGCC TGGTCCAGAT CGGACTCGGC ATGAGCCGGA TCGCCCGTGC CGCACTGGCC ATTTCGCCGG TGGTGGTGCA CGCCATGCTC GCGGGCATCG GTGTCACCAT CGTGATCCAG CAGACCCACG TGCTGTTCGG TGGTACCTCG CGAAGCTCGG TGCTGCAGAA CCTGATCGAC CTGCCGGCCC GCATCGGCTC GATGCACTGG CCCGATTTCG CGGTCGGCGC CATCGTGATC GCCGTGATGC TCCTGTGGCC GAAGCTCCCA CCGAAGTGGC GGCGCGTCCC GGGTGCCCTG GTCGCGATCG TGGCCGCCAC CGTCTTCTCG CTCGTGGTGC CCATGAACGT CGAGCGGATC AAGTTGAACG GCTCCATCAT CGACGCGATC GGGCTGCCGC AGCTGCCCAC CGGACAGTGG GCCGCGGTGG CTCTGGGTGT GCTCACCGTC GCCCTCATCG CCAGCGTCGA GAGCCTGCTC TCCGCGGTCG CCGTCGATAA GATGCACGAC GGTGCCAAGT CCAACCTCGA TCGTGAGCTG ATCGGTCAGG GTGCGGCCAA CTCGCTCTCC GGTCTGCTCG GCGGGCTGCC CGTGACCGGT GTCATCGTCC GCAGCGCGAC GAACGTGACC TCGGGGGCGC GGACTCGCTG GTCGGCCGTC CTGCACGGCG TGTGGCTGCT GCTGTTCTCG GTCGCGCTGT CCGGCCTGGT GGAGAAGATC CCCACCTCCG CGCTGGCCGG CCTGCTCATC GTGATCGGTG TGCAGCTGGT CAAGACGGCG CACATCCGCA CCGCTCGGCG CACCGGCGAC ATCGCGGTGT ACGCGGTCAC CATCCTCGGC GTGCTGTTCC TGAACCTGCT CGAGGGAGTG CTCGCAGGCT TGGTCGTGGC CATCCTGCTG GTGCTGTGGC GGGTCGCCCG CGCCTCGATC GAGGCCTCGC AGGACAGCGC GGGCCGCTGG CACGTCGCGA TCGACGGCTC GCTCAGCTTC TTCTCGCTGC CGCGCCTGTC GCGCGTGCTC GCCTCGGTGC CGCCCGGCGG CGATGTGGCC ATCGAGCTCA CCGTCGACTT CCTCGACCAT GCCTCGGCGG AGGAGATCAC CGAATGGGTG CGTCGCTACC GCGCTGGCGG CGGCACGGTG ACCATCGACG ACCTCGGTGT GGCGCAGATC CACGCGGCCG GTGATACCTC CCCGCGGCGG ACCACGGAGC GTTCGGCCGA GCGCGGCCTC CTGCCCTGGC GGGCGCACGC CCGCGGTGGG CTGGCCGACG GCATCGCGCG GTACCACCGC CGGCACGCGT CGCTGCTCAG CGACGATTTC GACGGGCTGA TCGATGGTCA GCGGCCGGAG GCACTCTTCT TGACCTGCGC CGATTCGCGG GTCGTACCGA ACGTGATCAC GGCCAGCGGG CCGGGCGATC TGTTCACCGT GCGCAACGTG GGCAATCTGG TCCCCGCGGG TGGGGTCGAC GGTTCGCTGG AGGCCGCCCT GACCTACGCG GTCGACAACC TCGATGTGAA TCAGGTGATC GTGTGCGGCC ACTCGGGCTG TGGCGCGATG GGAGTCGCGC TCGACCGCCC GGCCGTCCCG CCGAGCATCG AGCAGTGGAT CGAGCACGCG GACGCCTCGG TCGAGGCCTA CCGCGAAGGG CATCCGGTGC GGCGTGCGGC CGAGGCCGCG GGCTTCGGCC CCGTTGATCA GCTCGCGGTG GTCAACATCG CGGTGCAGCT GGAGAACCTG CGCAACCACC CGCTGCTGCG CGAGGCCGTG GCCGAGGGAC GGATCGACGT TGTCGGCCTG TTCTTCGACA TCGGCACCGG GCGGGTTCTG CGGGTCACCG ACACGGCGGT CGTCGAGGCG GACACCCTCA CCCACGTCTG A
|
Protein sequence | MNSSIREGVV VQEKLREVVR FDVPASIVVF LVALPLSLGI ALASGAPLMA GLIAGVIGGI VGGLMGGSPL LVSGPAAGLT VVVAELINKF GWKVTAAITV AAGLVQIGLG MSRIARAALA ISPVVVHAML AGIGVTIVIQ QTHVLFGGTS RSSVLQNLID LPARIGSMHW PDFAVGAIVI AVMLLWPKLP PKWRRVPGAL VAIVAATVFS LVVPMNVERI KLNGSIIDAI GLPQLPTGQW AAVALGVLTV ALIASVESLL SAVAVDKMHD GAKSNLDREL IGQGAANSLS GLLGGLPVTG VIVRSATNVT SGARTRWSAV LHGVWLLLFS VALSGLVEKI PTSALAGLLI VIGVQLVKTA HIRTARRTGD IAVYAVTILG VLFLNLLEGV LAGLVVAILL VLWRVARASI EASQDSAGRW HVAIDGSLSF FSLPRLSRVL ASVPPGGDVA IELTVDFLDH ASAEEITEWV RRYRAGGGTV TIDDLGVAQI HAAGDTSPRR TTERSAERGL LPWRAHARGG LADGIARYHR RHASLLSDDF DGLIDGQRPE ALFLTCADSR VVPNVITASG PGDLFTVRNV GNLVPAGGVD GSLEAALTYA VDNLDVNQVI VCGHSGCGAM GVALDRPAVP PSIEQWIEHA DASVEAYREG HPVRRAAEAA GFGPVDQLAV VNIAVQLENL RNHPLLREAV AEGRIDVVGL FFDIGTGRVL RVTDTAVVEA DTLTHV
|
| |