| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1968 |
|---|
| Symbol | rps12P |
|---|
| ID | 6164613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1735291 |
|---|
| End bp | 1735734 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641669131 |
|---|
| Product | 30S ribosomal protein S12P |
|---|
| Protein accession | YP_001795329 |
|---|
| Protein GI | 171186410 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00982] ribosomal protein S23 (S12) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000106893 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGGCA AGAAATCGCC GTATGGCCTA TTTGCCGGCG GCAAGCTGAA GAGGAAGAGG
CAGAAGTTCC GGTGGAACGA CGTCACATAC AAGCGTAAAA TGTTGGGGTT GGTGGAGAAG
TACGACCCCC TCGAGGGGGC GCCGATGGCC CGTGGAATAG TGCTTGAGAA GGTGGGCGTC
GAGGCGAGGA AGCCGAACGC CGCCGTTCGT AAGTGCGTTA GAGTTCAGCT TGTTAAAAAC
GGGAAGGTGG TAACGGCGTT TGTCCCTCTA GACGGTAGCT TAAACTACAT CAACGAACAC
GACGAAGTCG TCATCGAACG CATAGGCGGA CCCGAGGGGA GATCCCTCGG CGATATCCCC
GGCGTGAGGT TTAAGGTGGT AAAGGTAAAC GGGGTTTCTC TCTGGGCTAT CTGGAGGGGG
AAGAAGCAGA AGCCCACTAG GTAA
|
|---|
| Protein sequence | MPGKKSPYGL FAGGKLKRKR QKFRWNDVTY KRKMLGLVEK YDPLEGAPMA RGIVLEKVGV
EARKPNAAVR KCVRVQLVKN GKVVTAFVPL DGSLNYINEH DEVVIERIGG PEGRSLGDIP
GVRFKVVKVN GVSLWAIWRG KKQKPTR
|
|---|
| |