Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1881 |
Symbol | |
ID | 6165202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 1658623 |
End bp | 1659957 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641669043 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_001795242 |
Protein GI | 171186323 |
COG category | [H] Coenzyme transport and metabolism [S] Function unknown |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [COG1992] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000178657 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.46671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATAG CCGGTTTAGA CTCAGGCGGC GGCGCGGGGA TACACGCAGA CGTGAAGACC TTCGCGGCGA TGGGGGTCCA CGGCACCACG GCGCTGACCT GCGTAACCGC ACAAAACACA TACGAGGTCA GGGAGGCCCA GTGCCTCCAG CCGCCGCTCG TGAAGGCGCA GATACTGGCG GTTTGGGACG ACATGGGCAT AGACGCGGGC AAGACCGGAA TGCTGGGGAC AAGAGAAATA ATCGAGGAGG TGGCCGCCAC GGTCTCCAAG CTGGGCTTCC CCCTGGTGGT GGACCCCGTA ATGATCGCGA AGTCGGGCGC TCCGCTGATA TCTGAAGACG CCGTAGACAC CCTCAAGAGG AGGTTGCTCC CAGTGGCGAA GGTAGTCACG CCCAATAGAC ACGAGGCGGA GAAGCTGACC GGCATAAAGA TAACCAGCGT CGCGGAGGCG AGGAGAGCCG CGGAGGTCAT ACACAGGGAG TTCGGCACAG AGGTGGTGGT GGTCAAGGGA GGCCACCTAG ACGCCCCGGA GGCCGTCGAC GTGGTGTACA TAGGCGGCAC CTTCCACGAG CTGGCGACCC CCCGCCTAGA CTCGCGGGCG ACCCACGGAA CCGGTTGCTC CTACTCCGCC GCCATAGCCG CGGGGCTCGC CAAGGGCCTA CCCCCCCTGG AGGCCATAAA GACCGCAAAG CGCTTCATCT ACATGGCCAT CAGATACGGG GTGGCCAGGG GAAAGGGCCA CTGGCCCGTC AACCCCATGG CCTGGCTAGA GATGCCGGCG GAGAGGTGGA GGACGTTGGA GGAGCTGAGG GAGGCCCTAG AGGCCGTGGA GAGGCAAGCC GAGGTCTTTG CAAAGGCCAT ACCCGAGGTG CAGACGAACA TAGGATACGC CATAGACCCC CGCTACGCCA CGACGAGAGA AGACGTCGCC GCGGTGCCCG GGAGGATAGT GAACTACATG GGCCGCGCCA AGCCCTCCGG CCCGCCCGCC TTCGGCGCAA GCGACCACAT AGCCAGGAAG ATACTGGCGG CGCTGGCGAA AGACCCCCAG GCCAGGTCGG CCATGAACAT AAGGCTAGAC GCGGCGTACA TAGAGAAGGC GAAGAGCCTA GGCATGACAA TAGCCTACGT AGACAGGAGG AGGGAGCCGG AGGACGTCAA GAAGAGAGAG GGAGCCACCA TGCAGTGGAT CATCGAAGAG GCCTATAGAC AGACAGGGGG AAAAACGCCA GACCTAATAG TGGACTGGGG AGACTGGGGC AAGGAGCCCA TCATAACCGT ACTGGGGAAA ACCCCAAGGG AGGTGGTAGA GAAGGTCCTT CGACTCATAC GCTAA
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Protein sequence | MTIAGLDSGG GAGIHADVKT FAAMGVHGTT ALTCVTAQNT YEVREAQCLQ PPLVKAQILA VWDDMGIDAG KTGMLGTREI IEEVAATVSK LGFPLVVDPV MIAKSGAPLI SEDAVDTLKR RLLPVAKVVT PNRHEAEKLT GIKITSVAEA RRAAEVIHRE FGTEVVVVKG GHLDAPEAVD VVYIGGTFHE LATPRLDSRA THGTGCSYSA AIAAGLAKGL PPLEAIKTAK RFIYMAIRYG VARGKGHWPV NPMAWLEMPA ERWRTLEELR EALEAVERQA EVFAKAIPEV QTNIGYAIDP RYATTREDVA AVPGRIVNYM GRAKPSGPPA FGASDHIARK ILAALAKDPQ ARSAMNIRLD AAYIEKAKSL GMTIAYVDRR REPEDVKKRE GATMQWIIEE AYRQTGGKTP DLIVDWGDWG KEPIITVLGK TPREVVEKVL RLIR
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