| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1880 |
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| Symbol | |
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| ID | 6165100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1657459 |
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| End bp | 1658535 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641669042 |
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| Product | uncharacterized linocin/CFP29-like protein |
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| Protein accession | YP_001795241 |
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| Protein GI | 171186322 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000112619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.747435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCTA ACACTGTCAT GGTGTTTTCG AAAAACCCTG TTGACGTCGT TAGAGAGAAG
AAGTTCGACT CTCTGGAGGT TGCTGATGCC CTGCGTCTGG CCATAATCGC GGAGCTCGAC
GCCATCAGCC TATATCTACA GCTGGCTAAA TACGTAGAGG ACGAGAGGGT GAGGAGGGTT
TTTGAAGATG TTGCTAACGA GGAGAAGACG CACTTCGGCG AGTTTCTCGC CTTGCTGAAG
GCCTACGACC CCGCGCTGGC TGGCGAGCTA AAGGCCGGCG CTGGGGAGGT GGAGAAGCTC
ACCGGTATAA AAAGCGGCGA CCCCCCGGGG GACGGGGGGA ATAGAGCGGG TGAGGCCGGC
GGGGGCGGTT GGGTTGTGAA ATTCGTGGAG GGGGTGAGGG GGGCCGCGGC GTCGTCTAGG
AGGTTTAGGA GGTACCTCCA GACTATCTAC GTGGGGAGGG ACGCGGATGC CGTCGGCGTC
GAGGCGGCGG GGGCGCAGGG GTCGTTGGAG AGGGCTGTCA TACCGCTGAG GGAGGTCAGG
CTTAGGTTTA CTATCTCCTA CCGGGGGCTT GAGGAGTGGC TTTCGAGAGG CGGCGCGTTT
CCCGGAGAGG AGGCCGCGGC TAGGTTCGCC TACATGGAAG ACGCGGCTGT GGCTGAGGCG
TTGCTCAGGG GCGCCGGCAG AACTCTCGAA GCGTCTAGCT GGGAGAGGCC GGGGTCCGCC
ACCGCGGAGG TGGCTAGGGC TGTGGCTGAG CTGTACCGGG CCTACGTCCC AGAGCCCTAC
GTCCTCTTCG TGAGCCCGGG GAGATACGCC AGACTTGTGG TGGTGGAGGA GAGGACAGGC
GTCATGGAGC TCACCAGGGT GAAGTCCCTG GTGAGGGAGG TGGCGGTGAT CCCGCAGCTG
GAAGACGGCG TTGCCCTCCT GCTCTCCGCA AGCCCCGCCG TGGTAGACAT CGCAGTGGGC
GTAGACACAG AGGTTGTCCA TCTGGGCCCC GACGAGGCGG GCCACAGCTT CCTCCTGAGG
GAGACTCTTG CTGTTAGGAT TAAAAAACCT GAGGGTGTTG TTGTGCTTAG GGGATAG
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| Protein sequence | MRPNTVMVFS KNPVDVVREK KFDSLEVADA LRLAIIAELD AISLYLQLAK YVEDERVRRV
FEDVANEEKT HFGEFLALLK AYDPALAGEL KAGAGEVEKL TGIKSGDPPG DGGNRAGEAG
GGGWVVKFVE GVRGAAASSR RFRRYLQTIY VGRDADAVGV EAAGAQGSLE RAVIPLREVR
LRFTISYRGL EEWLSRGGAF PGEEAAARFA YMEDAAVAEA LLRGAGRTLE ASSWERPGSA
TAEVARAVAE LYRAYVPEPY VLFVSPGRYA RLVVVEERTG VMELTRVKSL VREVAVIPQL
EDGVALLLSA SPAVVDIAVG VDTEVVHLGP DEAGHSFLLR ETLAVRIKKP EGVVVLRG
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