Gene Tneu_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1750 
Symbol 
ID6166277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1540991 
End bp1541791 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content61% 
IMG OID641668913 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001795114 
Protein GI171186195 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.340635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.554698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA CGGTGATTGG GATGGGCAAC ATGGGGAGGG CCTTCGCCAA GCGCGCCGCC 
GCGCAGGGGT TCAACGTCTA CTGGTGGAAT AGGACGAGGG AGAAGGTCAA GGACGCGCCT
GGGAAAGCCA TAGGCAAGCC CTCTGAGGCG AGGGGGCTTG TGGCCGTGTT CGTGTCCGAC
GACGCCGCGC TCTTCGACGT TTTGCAGAAC ATAGGCGGCG ACTACATAGC GCTGTGCGGC
ACATACTCCA TCGACGCCGT GAGAAGGGCC GTGGAGAGCA TGGAAAAAGC CTTCGCGATG
CCGGTGGTGG GGAGCCCCCG CAACGTGGAG GGGGGAGACG CCATATACAT CGTAGGCGCG
CCCGACGACT TGTACATGAA GCTGAGGCCC ACCCTTGAGA AGTTCGGCTC TCTGTTCCAC
GTAGGCGACA GCGTGAAAGC CGCCGCCTTG AAACTCGCGT TCAACTCCCT GTTGATTTCC
ACAGTAGCCG CGTTGGGCGA GTCCCTCGCC CTCGCGGAGA AATACGGCAT AAGGCCTGAG
GTTTACAAGG CGCTCCTCTC CATGACGGTA TTCAAAGACG TCGCCGGCCG CTACATAGAC
AGGATGTTAA GCGGCGCGCA ACCCACCTTC ACCGTCCGAA ACGCCGCGAA GGACATGCGC
TACGCGGCAC AAGCCGCGGG AGAAGCCGGC GTTGGAAACG CGGCGATTAG CGGAGTAAAA
ACGCTGTATG AGCTCCTCAC CGCCTTGGGC CACGGCGAGG AGGACTACGT AAAAGCCGGG
TACATCCCCG GGAGGAGATG A
 
Protein sequence
MDITVIGMGN MGRAFAKRAA AQGFNVYWWN RTREKVKDAP GKAIGKPSEA RGLVAVFVSD 
DAALFDVLQN IGGDYIALCG TYSIDAVRRA VESMEKAFAM PVVGSPRNVE GGDAIYIVGA
PDDLYMKLRP TLEKFGSLFH VGDSVKAAAL KLAFNSLLIS TVAALGESLA LAEKYGIRPE
VYKALLSMTV FKDVAGRYID RMLSGAQPTF TVRNAAKDMR YAAQAAGEAG VGNAAISGVK
TLYELLTALG HGEEDYVKAG YIPGRR