Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1724 |
Symbol | |
ID | 6166148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 1516682 |
End bp | 1517365 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641668887 |
Product | dimethyladenosine transferase |
Protein accession | YP_001795088 |
Protein GI | 171186169 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00275557 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000266565 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGGAGGA GGCGGTGGAG CCAGCACTTC CTCAGAGATC CCTCGGCGGC GCGGTACATA GCCGAGTTGG TCCCCCCAGG CCTCGACGTC TTGGAGGTCG GGCCGGGCAG GGGAGCCCTA ACTATCCCCC TGGCCGAGAG GGCCAGGACG GTCTACGCCA TAGAGGTCGA CAGGCGCCTC GCCGAGCTCC TCCGAAAAAC CGCTCCCCCC AACGTCGTCG TAATCGAGGG GGACGCGCTT GAGGTGGAGT GGCCCAGGGC GGACTACTTC GTCTCAAACA TCCCCTACTC CATCACCTCC CCCCTCCTCA TGAAGCTGGC CAGACACAGG ATGCCCGCCG TCGTGACCGT CCAGAGGGAG GTGGCGGAGA GGCTCGCGGC AGCGCCCGGC GGGGAGAACT ACGGCAGGCT GACGGTTGCC GTCCAGTGCC ACTACGAGGT GGAGGTGCTG AGGACGCTAC CGCCGCGCGT CTTCCAGCCG CCCCCAAGGG TCTACTCCGC CGTCGTGCGC CTCACCCCCA GACCGCCCTG CGTAGAGGAC TTCGACGGGT TCCAGCGCTT CACCGCCTGG CTCTTCTCGG CGCGGCGCAA GACCCTCCGG CGGCTTGGGC TCGGGGAGGG GGACAGGCGA GTGTACCAGC TCTCCCTCGA GGAGATCGTG GAGCTGTACA AAAAACATAT GTAG
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Protein sequence | MRRRRWSQHF LRDPSAARYI AELVPPGLDV LEVGPGRGAL TIPLAERART VYAIEVDRRL AELLRKTAPP NVVVIEGDAL EVEWPRADYF VSNIPYSITS PLLMKLARHR MPAVVTVQRE VAERLAAAPG GENYGRLTVA VQCHYEVEVL RTLPPRVFQP PPRVYSAVVR LTPRPPCVED FDGFQRFTAW LFSARRKTLR RLGLGEGDRR VYQLSLEEIV ELYKKHM
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