Gene Tneu_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1581 
Symbol 
ID6166064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1396437 
End bp1397528 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content54% 
IMG OID641668739 
Productinner-membrane translocator 
Protein accessionYP_001794951 
Protein GI171186032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCGC AGATCGATCC CGGGGCCCTT CTCGTGCTTC TGCGCGAGAC GCTCATCATG 
TTTGCTATAT ATGGCGTATA TGTGCTTAGC CTAAATCTGG AGGCAGGCTA CCTAGGCTTG
CCTCAGTTCG GAAAGGTGAT GTACTTGGCG ATGGGCGGCG TTGCTGTGGG GGGCATCGCC
ACTAAGTTGG CCCTTTGGAT ATACGGCGGC GCCATATCCG CAAAAGCGGG AATAAGCCCG
CTGAAAGATT TAAATACGTA CTGCGCCGCA TATCAATACC AATCTATTGC CGTGGTAAAT
GACATTTTCA AGTCATCCCC GCTGGAGGGG ATCCTCTTCT TCCTTGTCGC AGTAGCCCTG
TCTGCTTTGT TGGCTGGGGT GTTGGGCGTC GTCATGGCTG GACCAGCTCT GAGGCTGAGA
GAGGACTACC TGGGCATTCT CTTTCTGGTC AGCGCCGAGC TGGTGAGAGT CGTCTCCACA
TACACGCCGC AGGTTGCTTG CGGCGTGTTT GGCGCCGTTG TGCCTGACCC CTTTGCTTGG
ATGGGCGACT ACAGGCCTTG GGGCTACCTC GCTGTTACTC TGCTTTTCCT CGTTTTCACG
TTTTTCATGC TGGATAGGCT TGTCAACTCG CCGTTTGGCC GCGCATTAAG GGCTATACGC
GACGCTGAGA CCGCGGCGAG GGTATTTGGA AAGGATATCG TAAAGTTCAG GGCAAGGGTT
CTGGGCGTAG CATCGGCGCT GGGAGGGGTG GCTGGCGCGT TATTCGTCTT CTACAACACA
TTTGTGAATA TGGGTCAATT CGTACCTTAC TACACCTTTG TCGCATGGGC TATGTTAATG
GTTGGGGGTA TGGGCAACAA CGTGGGGGCG TTGGTCGGCG TTGCTGTTTA TTACATCGTG
AGCAGGTCGC TTGAGATATA CAAGGATAGC CTAAGAGCCG TAATAAACGC CGATCCGACA
TTTCTTCAGT ACATCATATT TGGTATCGTG ATTATCGTAA TGGTCATGTT TAGGCCTCAG
GGTCTCGTGG GAGAGAGGCC GTCTAAGACG TTGAGCCGTC GGGTTTTGGA GAGGGTTAGG
GGGGAGGCCT AA
 
Protein sequence
MIPQIDPGAL LVLLRETLIM FAIYGVYVLS LNLEAGYLGL PQFGKVMYLA MGGVAVGGIA 
TKLALWIYGG AISAKAGISP LKDLNTYCAA YQYQSIAVVN DIFKSSPLEG ILFFLVAVAL
SALLAGVLGV VMAGPALRLR EDYLGILFLV SAELVRVVST YTPQVACGVF GAVVPDPFAW
MGDYRPWGYL AVTLLFLVFT FFMLDRLVNS PFGRALRAIR DAETAARVFG KDIVKFRARV
LGVASALGGV AGALFVFYNT FVNMGQFVPY YTFVAWAMLM VGGMGNNVGA LVGVAVYYIV
SRSLEIYKDS LRAVINADPT FLQYIIFGIV IIVMVMFRPQ GLVGERPSKT LSRRVLERVR
GEA