| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1314 |
|---|
| Symbol | |
|---|
| ID | 6166218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1174466 |
|---|
| End bp | 1175761 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641668469 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_001794687 |
|---|
| Protein GI | 171185768 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.348799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.383779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCCA GCAGGAGGGA ATGGCTTAAG GCCGTCGCCG CTTTTGCGGC CGGCGCGATA
GTTGGCTCCG GGGCTTCCTA CCTCGCCCTA CAGAGCGTTA AAACCGCCGT GGAGAAAACG
GCCACGACGC GGCCCGCTGA GGCAACAACG GCGCCTAGTA CGGCGGCCGG CTTACCTAAG
ATGAAAATTC ACTTCATCTA CGTGGGGCCT ATAGGCGACT ACGGCTGGAC GCACGCGCAC
GACGTCGGCA GAAAATACCT CGAGAGCGCC CTCTGCCCAG ACCCGAAGAA GTGGTGCATA
GTGGAGACCT CATACACGGA GAAGGTGCCC GAGGGGGAGG CCTACGACTA CATAAAGAGG
GCTGTGGCCG ACGGGGCAAA CATGGTGATA ACCACGTCCT ACGGCTATAT GGACGCCACC
AAGAAGGCCG CAAGGGATTA CCCAGACCGC TTCTTCGCCC ACTGCTCCGG CGAGTTCAAG
AGCCAAGACG AGCGGGCAAG TCTCCCCAAC TTCGCCGAGT ATTTCATAGA CCTCTACGAG
GCCTACTACC TCAACGGCAT CGTAGCCGGC AGGATGACCA AGACCAACAA GCTGGGCTAC
GTGGCGGCCT TCCTAATACC GGAGGTCATA CGCCATATGA ACGCCTTTCT GCTAGGGGCT
AGGGAGGTCA ACCCCAAGGT CACCATGGAC GTGGTGCAGC TAGGCGAGTG GTATAGCCCA
GAGCGCGCCA AGAAGGCCGC CGTGGCGCTT GTGGAGTCAA ACGGCGCCGA CGTGTTGGCC
TTCACCGAGG ACTCCCCCAC GGTGCTTCAA ACAGCGGAGG AGTACCAGAG AAGGGGGAAA
GCCGTGTGGT CGTTCTCGCA CTACAGCGAT ATGTCGAACT ACGGCCCCAA AGCCCACCTA
ACAGGACAGG TGGTCAACTG GGGCCCCATG TATGTGGAGA TGGCCATCAG GGCGTATCTG
GCTTGGGTCT CTGGCGAGAC GGCGCTGTGG TCCGAGTGGC CGCCGGAGAG GCCCCGCGAC
TACTGGTGGA GCATGAAGAA CTCGTACAGG TACTACGACT ACAAGAAGAA CCCAACCGAC
ATAATACTCC CGCTGAACCC CGCCGTGCCG GAGGAGGTAA AGGCGTACGT CGAGAAGCGG
AGGGCTGAGG TCATAGAAGG AGTGTGGGAC CCCTTCACTG GGCCTATCAA GGACATGAAG
GGCGTCCTCA GGGTAGCCGA CAGGATGAGG TTGAGCAAAG ACGACCTCTA CAACATGGAC
TGGTTCGTCG AGGGCTACGG CCAGCTTCCC ACATAA
|
|---|
| Protein sequence | MSASRREWLK AVAAFAAGAI VGSGASYLAL QSVKTAVEKT ATTRPAEATT APSTAAGLPK
MKIHFIYVGP IGDYGWTHAH DVGRKYLESA LCPDPKKWCI VETSYTEKVP EGEAYDYIKR
AVADGANMVI TTSYGYMDAT KKAARDYPDR FFAHCSGEFK SQDERASLPN FAEYFIDLYE
AYYLNGIVAG RMTKTNKLGY VAAFLIPEVI RHMNAFLLGA REVNPKVTMD VVQLGEWYSP
ERAKKAAVAL VESNGADVLA FTEDSPTVLQ TAEEYQRRGK AVWSFSHYSD MSNYGPKAHL
TGQVVNWGPM YVEMAIRAYL AWVSGETALW SEWPPERPRD YWWSMKNSYR YYDYKKNPTD
IILPLNPAVP EEVKAYVEKR RAEVIEGVWD PFTGPIKDMK GVLRVADRMR LSKDDLYNMD
WFVEGYGQLP T
|
|---|
| |