Gene Tneu_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1274 
Symbol 
ID6165709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1139490 
End bp1140704 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content63% 
IMG OID641668428 
Productglutamine--scyllo-inositol transaminase 
Protein accessionYP_001794647 
Protein GI171185728 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000457178 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCGA TAGAGGGGGG GAGGCCCGTC AGGGAGAAGC CCATCGTGGC TAGGCCTGCG 
GTATACAGCG AGGAGGTGAT CCGCGACATA GCCGAGGTCC TTAAATCCGG CGTCTTGACT
GCGCAACACG GCAGGTGGGT AAAGGCCTTC GAGGCAGAGC TCGCCGCCTA CCTCGGCGTG
AAATACGCCG TGGCGGTCTC CAACGGCACC ACAGCCCTCC ACACGGCGCT TAAGGCCATA
GGCGTGGGGC CGGGCGACGA GGTGGTGACC ACCCCCTTCA CCTTCGCCGC CACCGCCACC
GCAATTCTAC ACTCCAACGC CGTGCCGGTC TTCGCGGACA TAGACAGGGA AACCCTCAAC
CTAGACCCGG CCTCCGCCGA GGAGAAGATC ACCGAGAGGA CGAAGGCCGT GGTGGTGGTC
CACCTAGCCG GCATGCCCGC CGAGATGGAC CAGTTCATGA AGCTGGCGGA GAGATACGGC
GTGAAGATCG TGGAAGACAC GGCACAAGCC CTCGGCGCAG AGTACCGGGG GAGGAGGGCA
GGCTCCATAG GCCACATATC CACCTTCAGC CTATACGCCA CGAAGCACAT AACCTCCGGC
GAGGGAGGCG CCGTCGCCAC AGACGTCGCC GCCTACGCGG AGAGGGCAAG GCTAATTAGG
GCACACGGCG AGGTGGGGAA GTACAGCTAC GAGCTCCTCG GCTACAACTA CAGGATGACC
GAGATGCAGG GCGTACTCGC CTACCACCAG CTCAAGCAGA TGCCCGAGAT GCAGAAGAGG
CGCGAGGCCT ACGTAAAGAC GCTGTTGGAG GAGCTGGCCC CCCTAGAGGG CGACCTCCTC
ACCATCACAA GGCCTAGGCC CTACGTCAGA CACGCTTGGC ACCTCGTCCA GATACTACTC
GCCGTGGAGA AGCTAAAAAA GCCCCGCGAC TACGTAGTAG AGGCGCTGAG GGCAGAAGGC
GTGGGAAACG CCTTCGTCGC CTACCCAACC CCCCTCTACA AGACCCCCCT CTTCCAGCGC
AGAGAAGGCC ACGGCCTCGG CTGCCCCTGG ACCTGCCCAT ACCAGAGGCG CAAGGTGGAG
TACAAGCCCC TCCCAAACGC CGAGTGGGCC GCGGAGCGCG TCCTCTCGCT ACTGGTCATG
CCAAACCTAA CAGAACAAGA CGCGGTGGAC ACGGCGACGG CGGTGAAAAA GGTGCTAACA
GCCCTCAGAA GGTAG
 
Protein sequence
MLAIEGGRPV REKPIVARPA VYSEEVIRDI AEVLKSGVLT AQHGRWVKAF EAELAAYLGV 
KYAVAVSNGT TALHTALKAI GVGPGDEVVT TPFTFAATAT AILHSNAVPV FADIDRETLN
LDPASAEEKI TERTKAVVVV HLAGMPAEMD QFMKLAERYG VKIVEDTAQA LGAEYRGRRA
GSIGHISTFS LYATKHITSG EGGAVATDVA AYAERARLIR AHGEVGKYSY ELLGYNYRMT
EMQGVLAYHQ LKQMPEMQKR REAYVKTLLE ELAPLEGDLL TITRPRPYVR HAWHLVQILL
AVEKLKKPRD YVVEALRAEG VGNAFVAYPT PLYKTPLFQR REGHGLGCPW TCPYQRRKVE
YKPLPNAEWA AERVLSLLVM PNLTEQDAVD TATAVKKVLT ALRR