Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1170 |
Symbol | |
ID | 6165271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1061093 |
End bp | 1061761 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641668320 |
Product | hypothetical protein |
Protein accession | YP_001794545 |
Protein GI | 171185626 |
COG category | [S] Function unknown |
COG ID | [COG5493] Uncharacterized conserved protein containing a coiled-coil domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0259926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGACT TCGTGGGAGT TGACTTGAAG AGGGAGTTCC TAAGGCTTCT TCGGGAGGAT GAGGAGTTTA GGCTGGCTGT AGCCGGCCTC ATAGGGCTGG GGGAGGTGCT ACAGGAGCTG AGGAGGCTGA GGGAGGACTT CCAAACCTAC ATAAAAGAAC AGGAGAGGAG GTGGAGAGAA AACGAACGGA GATGGAGGAT GTACGAGAGG CGGTGGAGGG CCAACGAGCG GAGGTGGCGT GAGGCTTTTA AGAGGTTTGA GGCGCTTGAG CGGGGTCTCC AGAGGGTGGA TAGGCGGCTT GTCCTTCTGG GCGCCCGCTG GGGGGTGGAG GCGGAGGAGG CTTTTAGGGA GGCGGTGCGG GGGATCGTGG AGGATGTATT GGGGGTTGGG GAGGTTGTGC GGTGGTCCTA CTTCGACGGG GAGGGGCTGG TGTTCGGCTT CCCCTCGCCC GTGGAGGTGG ACGTGTTGGT TAAAGACGGC GTGCATATAC TCGTGGAGGT TAAGGCCTCC GCTACGGACA GCGACGTGGC TAAGCTGTGG CGGATAGGCC AGCTCTACCG CCGCGCCACC GGCGTAGAGC CGAAGCTGGC CTTGGTCACC CCCCACATAG ACGAGCGTGG TAGAAAAGCC GCCGAGGCGC TGGGCATCCA GGTTTATACC TATTTATAG
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Protein sequence | MVDFVGVDLK REFLRLLRED EEFRLAVAGL IGLGEVLQEL RRLREDFQTY IKEQERRWRE NERRWRMYER RWRANERRWR EAFKRFEALE RGLQRVDRRL VLLGARWGVE AEEAFREAVR GIVEDVLGVG EVVRWSYFDG EGLVFGFPSP VEVDVLVKDG VHILVEVKAS ATDSDVAKLW RIGQLYRRAT GVEPKLALVT PHIDERGRKA AEALGIQVYT YL
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