Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1078 |
Symbol | |
ID | 6165837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 963548 |
End bp | 964408 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641668230 |
Product | ABC transporter related |
Protein accession | YP_001794455 |
Protein GI | 171185536 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0529482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGCGT GTAGAGGGGT GGGGAGGAGG TTCGGAGGCT TCTGGGCCCT CAGGGGGGTG ACCTTCGAGG TGGGGAGGGG CGCGGCGGTG GCAGTGCTGG GGCCCAACGG CGCTGGGAAA ACCACGCTGG TGAGGATCTT GACCACCGAG CTGGCGCCCA CCGAGGGGGC GGCGGAGGTG GCCGGCTTAG ACGTGGTAAA AGACGCGGAG AGGCTTAGGC GGGTCATCGC GGCTGTGCCG CAGGAGGCTA GGCCGATAGA TTTCCTAACC CCCTACGAGT TCGTCCTGAG CTACCTCCTC CTGAGGGGGC TCCCCCTGAG GGAGGCGAGG AGGAGGACAG CCGAGGCGCT GAGGCAGTTC GGCCTGTGGG AGGCGCGCGG CAGGGAGCTG GACGCGCTCT CCGGCGGGAT GAAGAGGAGG ACGCTCGTCG CCGCCGTGTT TGCATCCGAG GCGGAGGTGG TCTTCCTCGA CGAACCGACG ACGGGGCTCG ACGCCTACTC CAGAAGGGTG GTGTGGAACG CGGTGGCTGA GCTGAAGCGC CGCGGCGCCA CAGTCGTTTT GACCACCCAC TACGCCGAAG AGGCGGCGGC TCTCGCCGAC TGGGTGCTGG TGCTGAAGGG GGGCCGCGCC GTGGACTTCG CCCCGCCGGC TAAGCTGGTG GAGAAGGTGC CGGGGAGATA CGTCGTGGAG GTGTACGGCG GCGCGGAGTT GGAGGGCCGC GCCGTGGCCG AGGTGGGGGG CAGGAGGCTG TACTACGTGG ACGCCCCCGC CTACGTGGAG GGGGCCGTGG TGAGGCCGAA GTCCCTGGAG GACTACATCC TTCTCAACGT CGGCGCGGCT GGGGGCCATG AAGGCGATTA G
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Protein sequence | MIACRGVGRR FGGFWALRGV TFEVGRGAAV AVLGPNGAGK TTLVRILTTE LAPTEGAAEV AGLDVVKDAE RLRRVIAAVP QEARPIDFLT PYEFVLSYLL LRGLPLREAR RRTAEALRQF GLWEARGREL DALSGGMKRR TLVAAVFASE AEVVFLDEPT TGLDAYSRRV VWNAVAELKR RGATVVLTTH YAEEAAALAD WVLVLKGGRA VDFAPPAKLV EKVPGRYVVE VYGGAELEGR AVAEVGGRRL YYVDAPAYVE GAVVRPKSLE DYILLNVGAA GGHEGD
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