Gene Tneu_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1055 
Symbol 
ID6164420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp938624 
End bp939463 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content62% 
IMG OID641668207 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001794432 
Protein GI171185513 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.869505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCCA TAAAGTTCCC AAGGCCGGAG GAGGGCTACG CCGTCTTGGT AGACCTAGAC 
AAGTGCATTG GATGCAGGGC GTGCCAGGTG GCGTGTAAGG AGTGGAACGG CCTCTCGGCC
GAGCGCACCC AGTTCCAAGG CGTGTTGACG TCCCCCCAGT CTCTAACCTC AAAGGACTGG
AAGGTGGTCT TCTACTACGA GGGGGCCACC AGGAAGCGCC TCCTGACGCC CTCTGGCGAG
GTGGCCTTCA GCCAGGTGGA GGTGGCGCCT CTCCCCTACA ACTGTATGCA CTGCGTAGAG
GCGCCGTGTG CCAGGGCTTG CCCGGTCGGC GCTATTAAGG TTTCGCCCGA GGGCGCCGTG
GTGATAGAGA AAGACGAGTG CATCGGATGC GGCTACTGCC AGATGGCGTG TCCCTACGAC
GTGCCGAAGA GAGGAGACGA CGGGAAGTTC TACAAGTGCA CCTTCTGCGT AGACAGGATA
CAAAACGGGA GGGAGCCGGC GTGCGTGGAG GTGTGCCCCA CGAGGGTCTT CACCTTCGGC
CCCGCGAAAG ACGTCATAGA GAGGGCTAGG CAGGAGGAGG CCAAGGGCAG GAAGGTCTAC
GGCCTCAACG TGGATAGGTA TGTGGGCGGC TCGGTCAGGT GGATCTATGT GACCTCGGAG
AGGAGGGGCT TTGCCTTGGA TAGCCACTTC GCGGATAAGG GCAAGCCCGT GGCTGTGGAG
GAGGCGAGAG AGGTTCTCAA GCCGCTTGTG ACCGTGGGGG GCGCGGCGCT CGCTGGCGCC
CTCGCCGTGT TGGGCTTAGC CGCCTGGCGG CGGGAGAGAG TACAGGAGAA AAAACAATAG
 
Protein sequence
MVSIKFPRPE EGYAVLVDLD KCIGCRACQV ACKEWNGLSA ERTQFQGVLT SPQSLTSKDW 
KVVFYYEGAT RKRLLTPSGE VAFSQVEVAP LPYNCMHCVE APCARACPVG AIKVSPEGAV
VIEKDECIGC GYCQMACPYD VPKRGDDGKF YKCTFCVDRI QNGREPACVE VCPTRVFTFG
PAKDVIERAR QEEAKGRKVY GLNVDRYVGG SVRWIYVTSE RRGFALDSHF ADKGKPVAVE
EAREVLKPLV TVGGAALAGA LAVLGLAAWR RERVQEKKQ