Gene Tneu_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1034 
Symbol 
ID6164980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp924444 
End bp925214 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID641668186 
ProductABC-2 type transporter 
Protein accessionYP_001794411 
Protein GI171185492 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.150436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCC CCCTCTACGC CCTCTACAAG AGGGAGGTCC TCCGCCTCCT CAGGAGCAGA 
TACATGTGGC TCATGGTGGC GGCCCAGCCC ATCCTCTGGG TGGTCTTCTT CGGCAACAGC
CTGGCGGGCC TCCCCCGGGG CTTCCTCGCC CAGTACTTCG GCGTTGAGAA CTACCTGGCC
TACATGATAC CCGGCATGGC CTCCATAGTC ATGCTCACCA CCGGCATGTT CGCCTCCATG
AGCCTAGTCT TCGACAAGAG GGTGGGGTAC CTAAGGAGGG TCCTGGTGAC CCCCACCCCC
AAAACCGCCG TCTTCCTCGC CAAGGCCCTA GGCGCCGCCA CCCGCGGCCT CCTCACGATA
CCCGTCATAC TGGCGGTCGG CGCCGCCTTC GGCGTGAGGT ACAACATAAA CCCAGCCGCC
CTAGCCCTCT GGGCCGCCGC ACTAGCCGCC GCAGGCATGG GCTTCGCCGC CCTCTTCACA
GCCCTCTCGG TAAACACCAC AGACGTCCAC GCCCCCGGCG TAATAAGCAA CTTCATCACC
ATGCCCCTCA TGTTCACCTC CAGCGCCCTA TTCCCACGCC AGTTCTTCCC AGACTGGCTA
AAGGCCATAA GCGAGGTGAA TCCCCTTACA TACCTCACAG AGCTCGGCCG CGAGGCCCTC
GTATACGGCG CCCCCCCAAG CCCCACAGCC GCCCTAGCCA CAGCCGCCTT CGCCGCCGCC
ACCCTAACCG CCGGCGTCAT AGCAGTAGAG AAGTGGCTCA ACGCAGATTA A
 
Protein sequence
MISPLYALYK REVLRLLRSR YMWLMVAAQP ILWVVFFGNS LAGLPRGFLA QYFGVENYLA 
YMIPGMASIV MLTTGMFASM SLVFDKRVGY LRRVLVTPTP KTAVFLAKAL GAATRGLLTI
PVILAVGAAF GVRYNINPAA LALWAAALAA AGMGFAALFT ALSVNTTDVH APGVISNFIT
MPLMFTSSAL FPRQFFPDWL KAISEVNPLT YLTELGREAL VYGAPPSPTA ALATAAFAAA
TLTAGVIAVE KWLNAD