Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1013 |
Symbol | |
ID | 6165028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 906561 |
End bp | 908552 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641668166 |
Product | hypothetical protein |
Protein accession | YP_001794391 |
Protein GI | 171185472 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.655102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000918159 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCCTAGGG GGGCCCTGGT CCTGCTGGCG GCCGCCTTCC TAGCCCTGGG CCAGGCTGTG GCTTTTCAGC CGGCCGTGGA GCGGCTCTTC CTCGGGGGCC AGTGGGTCGA CGTGCCGAAG TACCCCGGCG ACGTCGGTCT GCTCAAGCTG TCTTACTACC TCGCCGACCA ACACGTGGAC GTCTCCATCT CCCTCGCTGG GTGCGGCCTC AAGGCGGAGC CCTATAAGGC ACCGTCGGCT GGCCCCGGCG TGTTTGAGGC CGTGTTGAAG GTCAGGGCCG ACGGGCTGGG GCGGAGGGAG GGCTGCTCCG TTGTTTTTAA GTCGAGGTAT AGGTATAAGT CGGGGGCTTT AACTGACGGC GTGGAGTGGG TGGACTACCT AGAGGTGGAG GTGCCCAACT ACCCGTCCCC CCAGGCGGAG GCGGTGGGCT CCCTCTATCT GGGGGCCAGG GGGAGGGTTC TGCTTAGGGT TTGGGACAGC TACCGCTACA TGGGCGTGGT GGAGGTTTCG GCGGCTGGCG CAAGGCTCTA CAGCCCCGGG GGGTACTACG GCGACGTCGG CAACCTCACG GCGTATTTAG ACGTGGCGCC GCTGGACTAC TCGGCGTCGC TTGTGGTCAC GGTCAAGGCT AGGGACGCCC TGGGGAGGGA GGTCGCCGTC TCTAGGCAGG TGCCTCTTTC TGTACAGCCG AGGCCAGCCC CCAGGCTGGA GGCGTCCCCC CAGTGGCTTC CGGCCGGGGG GTGCGGGAGG GTGCGCATCT CGGTTTCCTA CCCCATCCCC CTCAACGGCA CGGTGTATGT GCCCGACGGG TCCGCACCGC TGGCCGGGGG GCGCGGCGTG GTGTACACTA CCGTCTGCGC CGCGGGCGGC TACGCCTCAG TCCCCGTGAC CGTCCAGCTG GACACGGGGG CGGTGGACAA AGCAGAGCTG CAGCTACCCG TATACCCAAT TTCGCCGTTT CCCCTCAACG TCACTGTACA GCCGGGCGTT TTGACGGCTG GAGACGTCAA CAGGGTGTCT ATCTACGTGA CGGCACCCGG GCCCTACGTG GGGGAGCTGT CCGTCGACGG CGCGGCCTCT CTCACGGGGA CGCCCGTCAG ATTTTCGGGA AACGGCACGA CGAGAGTCGA CCTTCTCCTC ATCCCCACCT CGGGCGTAGT CACCATCGAC GTGGCCGTGT CCGCCGGGGG CTACACCGCG AGAAGCTCGG TGGCGCTCGT GGCGTCGCAG AAGGCGCCTC TGGAGGTTTA CGTAGAGCCG CGGGAGGTGG CGGCCGGCGG TAGCCACGTG GTGAAGGTGG TGGTGAGGCC TAGGGTAAAC ATGTCCTACC TCGCGGTCAC CCTCTACCCC GTCTCTGGGG CCGTGTTTCC AGAGGCCACG TTCCGCCTGG GGCCCCAGGG AGGGGCCGTG GAGCTACCCA TACAGATCCC CGCAGATGTG GTGGGGAACG TGGCAGTTGG CTACAGAGCC GCCTACACCC TGGCCTCGGG GGTTTCTGGC GAATACAGCG GGACTCTCTA CCTAGTGGCG CTCCAGAGGC CGCAGCTCTA CATACAGACC TCGGTGGTGC CGGAGACGCC TACGGCGGGG GAGCCGTTCT ACCTGGCAGT TAGGCTCTTC AACGCGGGCG GGGTCGAGGC GAGAGACGTC GTTGTAAATG TAACAGGCGC GAGGGTCGTA AGACCCCCGC CCCCGTTGGG GGCGATACAG CCGCAGGGGA GCAAAGACGC GGTCTTCACC CTGGTGGCCG ACGGGGCGGG GCCGCGCAAT ATCACCATCA CGGCTGTCTA CAGAGACGTC TTGGGGAGGT CCTACGCGGC GCGAAGCTCC GTGGCTCTCC ACGTCAACGC CAGCGCGCCG CCTGCCGCCA CGCCGCCTCA GCAGAGCGGC GTGTCGGAAC AGACGTGGCT CGTCCTGGCG GCGCTCATAG CGCTGGGAGC CGCGGTGGTG GCTGTCGGCT TGTGGAGGGG GCGTGTTGCC AGACCTCGCT AG
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Protein sequence | MPRGALVLLA AAFLALGQAV AFQPAVERLF LGGQWVDVPK YPGDVGLLKL SYYLADQHVD VSISLAGCGL KAEPYKAPSA GPGVFEAVLK VRADGLGRRE GCSVVFKSRY RYKSGALTDG VEWVDYLEVE VPNYPSPQAE AVGSLYLGAR GRVLLRVWDS YRYMGVVEVS AAGARLYSPG GYYGDVGNLT AYLDVAPLDY SASLVVTVKA RDALGREVAV SRQVPLSVQP RPAPRLEASP QWLPAGGCGR VRISVSYPIP LNGTVYVPDG SAPLAGGRGV VYTTVCAAGG YASVPVTVQL DTGAVDKAEL QLPVYPISPF PLNVTVQPGV LTAGDVNRVS IYVTAPGPYV GELSVDGAAS LTGTPVRFSG NGTTRVDLLL IPTSGVVTID VAVSAGGYTA RSSVALVASQ KAPLEVYVEP REVAAGGSHV VKVVVRPRVN MSYLAVTLYP VSGAVFPEAT FRLGPQGGAV ELPIQIPADV VGNVAVGYRA AYTLASGVSG EYSGTLYLVA LQRPQLYIQT SVVPETPTAG EPFYLAVRLF NAGGVEARDV VVNVTGARVV RPPPPLGAIQ PQGSKDAVFT LVADGAGPRN ITITAVYRDV LGRSYAARSS VALHVNASAP PAATPPQQSG VSEQTWLVLA ALIALGAAVV AVGLWRGRVA RPR
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