Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1009 |
Symbol | |
ID | 6164951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 902549 |
End bp | 903592 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641668162 |
Product | ABC transporter related |
Protein accession | YP_001794387 |
Protein GI | 171185468 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000145276 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACAGAGG TCAAGGTGGA GCGCCTTAGC AAAGTTTTCG ACGGCAGGGT AGCCGCGGTA GACGGCGTCG ACCTCTCCAT CGGCCACGGG GAGATCCTCG CCGTCTTGGG GCCGTCGGGC TGCGGGAAGA CCACCCTCCT CCGCCTGGTG GCGGGGCTGG AGGAGCCCAC CTCGGGGAGG ATCTACTTCG ACGGTAGAGA TGTGACGCGT CTACCGACGC AGGAGAGAAA CACCGCCATC GTCCCCCAGA CCTGGGCCCT GTGGCCCCAC ATGACCGTCT TCGAAAACGT GGCCTACGGC CTGAGGCTGA GGAAGAGGAG GCTCGGCCTC ACGGAGGGCG AGATAAGGAG GCGCGTGGAG GAGGCCCTCG GCCTCGTGGG CCTCGCCGAG TTGGGAGACA GAAGGCCCTA CCAGCTGTCT GGAGGCCAGC AACAGAGGGT CGCGCTGGCG AGGGCGCTGG TGGTCCAGCC GGCGGTGCTC CTCCTCGACG AGCCTCTGGC CAACCTAGAC GCCAAGCTTA GGCTCGAGCT GAGGGAGGAG GTGAGGAGGG TCGCCAAGAG GCTCTCCATA ACCACACTAT ACGTGACGCA CGACCAGGAG GAGGCCATGG CCGTGGCCGA CCGGATCGCG GTCATGAACG CCGGCAGGAT ACTCCAGGTG GGGACCCCCG AGGAGATATA CCACAGCCCC GCCCACCTCT TCGTCGCCAC CTTCCTAGGC CGCTCCAACC TGCTGAGGGG CCGCGTGGCC GAGGTCAAGG GCGGCGAGGC CGTGGTAGAC GTCGGCTTCC CCCTCGTGGC CAGGACCCCC CAGGGGGCCG CGCCGGGGGA CCCCGTGGAG GTGGTGGTGA GGCCGGAGGA CGTTAGGCTG GGCGCCGGCG GGGTGAGGTG CACAGTAGAG GACGTGGTCT TCCTGGGGAG GCACTACCAG ACCACCCTGA GGTGCGGCGG GGCTGTGCTC AAGGCCGAGG GGCCGAGGCC CGAGGCGCGG CCGGGCGAGG AGGTGCGGGT GGAGGTGGCG AGGGCCTGGG CGTTTAAGCC ATGA
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Protein sequence | MTEVKVERLS KVFDGRVAAV DGVDLSIGHG EILAVLGPSG CGKTTLLRLV AGLEEPTSGR IYFDGRDVTR LPTQERNTAI VPQTWALWPH MTVFENVAYG LRLRKRRLGL TEGEIRRRVE EALGLVGLAE LGDRRPYQLS GGQQQRVALA RALVVQPAVL LLDEPLANLD AKLRLELREE VRRVAKRLSI TTLYVTHDQE EAMAVADRIA VMNAGRILQV GTPEEIYHSP AHLFVATFLG RSNLLRGRVA EVKGGEAVVD VGFPLVARTP QGAAPGDPVE VVVRPEDVRL GAGGVRCTVE DVVFLGRHYQ TTLRCGGAVL KAEGPRPEAR PGEEVRVEVA RAWAFKP
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