Gene Tneu_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0937 
Symbol 
ID6164368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp831462 
End bp832664 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content64% 
IMG OID641668094 
Producthypothetical protein 
Protein accessionYP_001794320 
Protein GI171185401 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.391687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00182616 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTGGAAG TGCTTCTGGA GATCCTTAGG CTGTCTTGGC AGGCCCTCTG GGAGAGGAAG 
GGGAGGACGG TGGGGGCCAT CGTCGGCGTC GTCATCGCCT TCTCGGCGCT GAGCTACGCG
CTGCTCCTCG GCCAGACCTT TAAGGACTAC ACCACGCGCT ACTTCACCTC CAACTTCCAG
ACCAACGTGG CGTACGTCAC AGGGGCGCTG TTTACAGACG CAGACGTCGG CACGCTGTCG
ACCATCGAGG GCGTGGAGGC GGCTATCCCC ATAGCCAGCG CCAGAGGCGT CGTCAGGATC
TCGGGCCAGG CCACGCCTAT CCCGGTCACT GTATATGGGG TCGACCCTGC CCTCCTGCGG
CTCCTCCTGC CGCCCACCGC CCTCTACGAG GGGGAGATGG TCGTCGGGTC GAGCTTGGTG
CTGGCTGGGT ACTACGTGGC CTTCGACAGA TCCACGGGGG AGCAGAGGAT CTCCGTCGGG
TCGCCCCTCT CCCTATCCAT AGGCAAGAGG TCGATAAACG CCATCGCCTC GGGGATACTC
GCCACGGGGG CCCTGGGCTA CATAGACACG GCGAGGGGGG TGGTGATGGA CATCTCGGCC
TTCCGCCAGG CCACCGGCGT GACGACGTAC AGCGTTGTGG TGCTCGTCCT CAGAGACCCC
TCCCTCGTGG AGCAGGTGGC AAACGACGTG AGAGCCGCCT TCCCCAACGT AGACGTGATA
TCCCCCCAGG CGGTGCTCCA GACTATAAAC AGCTTCTTGA CCTCCTTCCA GCTCTTCCTA
GGCCTAATAG CGGGCGTGAG CACCGTCATC ACAGCCCTCT GGCTCTACGA CACCATGTCC
ATAAGCGTGG TCCAGAAGAC CAAGGAGATC GGAGTTCTCA GGGCCCTCGG CTACAAGAGG
AGACACGTTC TGGCCATGTT CCTCGGGGAG GCCGCCATAG TCGCCCTCAT CGGCGTCGCC
ATCGGAGCCG CTCTGCTGCT CCCCCTCTCG CAGATGGGGC TGCCCTTCGG CGGCCAGAGC
ACATCAGCCG CGGCGCCCCG CACGGCCCCC CACCCCACCT TCAACATCTC ACACATCGAG
GTTGACCCGG CGATCGTCGC CGCCACAGCC GCCCTGGTGG TGGGCATCAA CCTCCTGGGG
GCCTTCCTCC CCGCCTACAG AGCCAGCAGG ATAAACATCG TGGCGGCCCT CCGCTACGAG
TAA
 
Protein sequence
MVEVLLEILR LSWQALWERK GRTVGAIVGV VIAFSALSYA LLLGQTFKDY TTRYFTSNFQ 
TNVAYVTGAL FTDADVGTLS TIEGVEAAIP IASARGVVRI SGQATPIPVT VYGVDPALLR
LLLPPTALYE GEMVVGSSLV LAGYYVAFDR STGEQRISVG SPLSLSIGKR SINAIASGIL
ATGALGYIDT ARGVVMDISA FRQATGVTTY SVVVLVLRDP SLVEQVANDV RAAFPNVDVI
SPQAVLQTIN SFLTSFQLFL GLIAGVSTVI TALWLYDTMS ISVVQKTKEI GVLRALGYKR
RHVLAMFLGE AAIVALIGVA IGAALLLPLS QMGLPFGGQS TSAAAPRTAP HPTFNISHIE
VDPAIVAATA ALVVGINLLG AFLPAYRASR INIVAALRYE