Gene Tneu_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0576 
Symbol 
ID6165674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp527949 
End bp528491 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID641667729 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_001793964 
Protein GI171185045 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.252977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0673929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGC CTACGTCATA TAGGCCCACC CCCTGGGACG TGCTGGAGCT GGAGTGGTGC 
CCGCGCTACC TCTGGCTCTC CAAAAGACAC GGCGTCCCCA CGACTCCCTC CATGGCCAAG
GGCAGACAGG AGGAGCAGGC GCTGAGGAAG AAGCTCGCGG CCGCCCTGGG GGCAGAGCCC
AAGCCGGTCT ATATAGACGC CGGGTGGACA CACGGCGTTG TGGACATGGT GGCGCGGAGG
CACTCGGCGG TGCCCGTGGA GATAAAGACG GGAGTCCCCC GGAGAGAACA CAAGTGGCAA
CTATATGCAG AGGCCTACCT AGTGAAAGCC CAGGGGCACT CGGTAAGCCT CGGCGTCATA
GCCTACGGCG AGAGGCTGGC CAGGCTACAG ATAACCCCAG CGGAGCTCAA GGTAGCAGAG
GCCCTGCTCA TAAAGGCGGC AGAGGTAGTA GAGGGGCCGC CCCCGCCCCC CAGAAAAACC
CCGAAGTGCG CCTACTGCCA ATACCGGCCA ATCTGCAGCG GCGCCACAAA CCGCCTTCCC
TAG
 
Protein sequence
MPKPTSYRPT PWDVLELEWC PRYLWLSKRH GVPTTPSMAK GRQEEQALRK KLAAALGAEP 
KPVYIDAGWT HGVVDMVARR HSAVPVEIKT GVPRREHKWQ LYAEAYLVKA QGHSVSLGVI
AYGERLARLQ ITPAELKVAE ALLIKAAEVV EGPPPPPRKT PKCAYCQYRP ICSGATNRLP