Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0576 |
Symbol | |
ID | 6165674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 527949 |
End bp | 528491 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641667729 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_001793964 |
Protein GI | 171185045 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.252977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0673929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAAGC CTACGTCATA TAGGCCCACC CCCTGGGACG TGCTGGAGCT GGAGTGGTGC CCGCGCTACC TCTGGCTCTC CAAAAGACAC GGCGTCCCCA CGACTCCCTC CATGGCCAAG GGCAGACAGG AGGAGCAGGC GCTGAGGAAG AAGCTCGCGG CCGCCCTGGG GGCAGAGCCC AAGCCGGTCT ATATAGACGC CGGGTGGACA CACGGCGTTG TGGACATGGT GGCGCGGAGG CACTCGGCGG TGCCCGTGGA GATAAAGACG GGAGTCCCCC GGAGAGAACA CAAGTGGCAA CTATATGCAG AGGCCTACCT AGTGAAAGCC CAGGGGCACT CGGTAAGCCT CGGCGTCATA GCCTACGGCG AGAGGCTGGC CAGGCTACAG ATAACCCCAG CGGAGCTCAA GGTAGCAGAG GCCCTGCTCA TAAAGGCGGC AGAGGTAGTA GAGGGGCCGC CCCCGCCCCC CAGAAAAACC CCGAAGTGCG CCTACTGCCA ATACCGGCCA ATCTGCAGCG GCGCCACAAA CCGCCTTCCC TAG
|
Protein sequence | MPKPTSYRPT PWDVLELEWC PRYLWLSKRH GVPTTPSMAK GRQEEQALRK KLAAALGAEP KPVYIDAGWT HGVVDMVARR HSAVPVEIKT GVPRREHKWQ LYAEAYLVKA QGHSVSLGVI AYGERLARLQ ITPAELKVAE ALLIKAAEVV EGPPPPPRKT PKCAYCQYRP ICSGATNRLP
|
| |