Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0377 |
Symbol | |
ID | 6165342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 338572 |
End bp | 340620 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641667536 |
Product | periplasmic binding protein |
Protein accession | YP_001793772 |
Protein GI | 171184853 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.786135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGGA AAATAATTTC CCTATTGGTG GTAATACTGG CGGCTATTGC CGCAGTATAC CTCCTTTTGC CAAAGGGGCC GTCCCCCGCT CAGACGGCGC CTACGGCGGC TGTCTCGCCT ACGGCTTCTC CCACAGCAGT CGCTACGCAA CCGCCTGCTC AGACCCCGGC GGTCTCCCGG CAGATCGTCG TCGTTGATTT CCGAGGTAAG AGGATTGTTC TTCCTAAGCC TCCCGAGAGG ATCGTGGTGC TCAACTCCTA CTGGGCAGAG GTGTTGGTGG CGTTGGGGGC TGGGGATAAG ATCGTCGGCA TCGGGAGATA CGTAGACGCC GACGAGTATC TGCCGCCGGA GGTGAGGAAG AAGCCGGTGG TTGGGGATCT ATTCGGCGGG GTTAACGTGG AGGCGGTGGT GGCTCTCAAG CCTGACGTGG TGGTGACAGA CTACGGCTAT GGAAAAGCAG ACGAGGTGAT AAAGAGACTT GAGGAGGCGG GCGTCCCGGT CGTGGCGTTG TTTATGCGGG GGACTCCAGA CGAGTTGAGG GCTGTGGAGG TGTTGGGCAA CCTCACGGGG GCTGTGGATA AGGCGAGGGA GCTGGAGGCC TTTATGGCCA AGAGGTTTGA GGAGCTGAGG GCCGGGGCGG CGAAGATAAA GGAGAGGAAG AGGGCTGTGT TGATCTTCGG CAGTAGCATA CTGGCCGGCG GCCCGCTGTC TTTAGCCGCC AACTCGTCCT TCGGCATGGC GTTGGTTGAG GCCGGCGCTG TAAACATGGC GTTGGAGCAG TTCCCAAACC AGGCCTGGCC TAAGATAGAC ATGGAAACGT TGATAAGGTG GGACCCCGAC GTGGTTTTAA TAGCGGCGTC TGCGGAAGAC GCCGGGAGGA TATTCGACAA GATCAGATCA GACGAGAGGT GGCGCGTCTT AAAGGCGTAT AAAAACGGCG AGATATACCT AGTCCCCTGG GGGTCTAAGA TAGGGGATAT ATTCAACTGG GGGCCCCGGG ACGTAGTCGG CAGGGAGTAC ATCGCGGAGG TGCTCTATCC CGACGTCTAC GCCTTTGACT GGCGGGGAGA TCTAGAGCGC CTAGGAGATA TGTACGGCGT GTCTATCCCG CCGCAGACCT ACGCCGTGTA CAACATAAAC TGGAAGGAGG TGGTAGACCT GGCGGGGAAC GTGGTTAAGA TCCCCAGCAG GGTGGAGAGG TTTGCCACTT TTGTCGCATA TCAACTCCCC ATCGCCTTCA ACGTCACCTC TAGGCTCGTC GCCGTGGGGA GAGACGCTGT CCAAGGCGTC TTCGCCCCTC TGATGAAGGC GGCTTTCCCC GCCGTGGTAA ATCTGCCGAC GCCTGGAGAT CGCTTCAAGG TAAACGTCGA AGCTCTCGTC CAGCTGAAGC CGCAGGTGGT GTTTAACTGG GCGGTAAACC CCGACGACGT AAGAACAATG CAGAGGGCTA ACCTAACCCT GGTACAGGTG GTGGTTAACA ACTTCACAGA CGCCGAGAGG CTCGTCTGGC TATACGGCGT GGTCTTCGAC AGATTGCCCA GGGCTAGACA GATCGTCAAC GACATGGAGG ACATAGTGAA GTTTGTCGCC AACAGAACCG CGTCGGTGAG AGAAAAGGCG AGGGTCCTAT ACCTCTGGGT AGACCCGCTG ACGGTGGCGG GAGGCGCCTC CCTCTTTAGC CAAAACATAG AGCTGGCGGG CGGGGTAAAC GTAGCCGCGG CCGACTACCC CACCATGAAC ACCGTGAAGG TGGACCCCGA GCGGATACTT AAGTGGAACC CAGACGTGAT AATCATCGCC TGGCAGGCGA GATACAACGA GTCTGCCGTC TTGAACAACC CGGTATACCG CGGGGTAAAC GCCGTGAAAA ACGGCAGAGT ATACAAAAAA CCCATCCTCT CAGAGATGAC CCCGGACGCC GCCCTCTCGG TGTTGTGGAC AGCCACAAAG CTCTACCCAG ACCTCTTCAG AGACGTAAAC TTCACCAAGG TAGCCGACTA CTACTACAGG AGGTGGTACG GCGTATCCTA CACACAGGTC TGGGGGTAA
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Protein sequence | MKWKIISLLV VILAAIAAVY LLLPKGPSPA QTAPTAAVSP TASPTAVATQ PPAQTPAVSR QIVVVDFRGK RIVLPKPPER IVVLNSYWAE VLVALGAGDK IVGIGRYVDA DEYLPPEVRK KPVVGDLFGG VNVEAVVALK PDVVVTDYGY GKADEVIKRL EEAGVPVVAL FMRGTPDELR AVEVLGNLTG AVDKARELEA FMAKRFEELR AGAAKIKERK RAVLIFGSSI LAGGPLSLAA NSSFGMALVE AGAVNMALEQ FPNQAWPKID METLIRWDPD VVLIAASAED AGRIFDKIRS DERWRVLKAY KNGEIYLVPW GSKIGDIFNW GPRDVVGREY IAEVLYPDVY AFDWRGDLER LGDMYGVSIP PQTYAVYNIN WKEVVDLAGN VVKIPSRVER FATFVAYQLP IAFNVTSRLV AVGRDAVQGV FAPLMKAAFP AVVNLPTPGD RFKVNVEALV QLKPQVVFNW AVNPDDVRTM QRANLTLVQV VVNNFTDAER LVWLYGVVFD RLPRARQIVN DMEDIVKFVA NRTASVREKA RVLYLWVDPL TVAGGASLFS QNIELAGGVN VAAADYPTMN TVKVDPERIL KWNPDVIIIA WQARYNESAV LNNPVYRGVN AVKNGRVYKK PILSEMTPDA ALSVLWTATK LYPDLFRDVN FTKVADYYYR RWYGVSYTQV WG
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