Gene Tneu_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0377 
Symbol 
ID6165342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp338572 
End bp340620 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content58% 
IMG OID641667536 
Productperiplasmic binding protein 
Protein accessionYP_001793772 
Protein GI171184853 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.786135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGA AAATAATTTC CCTATTGGTG GTAATACTGG CGGCTATTGC CGCAGTATAC 
CTCCTTTTGC CAAAGGGGCC GTCCCCCGCT CAGACGGCGC CTACGGCGGC TGTCTCGCCT
ACGGCTTCTC CCACAGCAGT CGCTACGCAA CCGCCTGCTC AGACCCCGGC GGTCTCCCGG
CAGATCGTCG TCGTTGATTT CCGAGGTAAG AGGATTGTTC TTCCTAAGCC TCCCGAGAGG
ATCGTGGTGC TCAACTCCTA CTGGGCAGAG GTGTTGGTGG CGTTGGGGGC TGGGGATAAG
ATCGTCGGCA TCGGGAGATA CGTAGACGCC GACGAGTATC TGCCGCCGGA GGTGAGGAAG
AAGCCGGTGG TTGGGGATCT ATTCGGCGGG GTTAACGTGG AGGCGGTGGT GGCTCTCAAG
CCTGACGTGG TGGTGACAGA CTACGGCTAT GGAAAAGCAG ACGAGGTGAT AAAGAGACTT
GAGGAGGCGG GCGTCCCGGT CGTGGCGTTG TTTATGCGGG GGACTCCAGA CGAGTTGAGG
GCTGTGGAGG TGTTGGGCAA CCTCACGGGG GCTGTGGATA AGGCGAGGGA GCTGGAGGCC
TTTATGGCCA AGAGGTTTGA GGAGCTGAGG GCCGGGGCGG CGAAGATAAA GGAGAGGAAG
AGGGCTGTGT TGATCTTCGG CAGTAGCATA CTGGCCGGCG GCCCGCTGTC TTTAGCCGCC
AACTCGTCCT TCGGCATGGC GTTGGTTGAG GCCGGCGCTG TAAACATGGC GTTGGAGCAG
TTCCCAAACC AGGCCTGGCC TAAGATAGAC ATGGAAACGT TGATAAGGTG GGACCCCGAC
GTGGTTTTAA TAGCGGCGTC TGCGGAAGAC GCCGGGAGGA TATTCGACAA GATCAGATCA
GACGAGAGGT GGCGCGTCTT AAAGGCGTAT AAAAACGGCG AGATATACCT AGTCCCCTGG
GGGTCTAAGA TAGGGGATAT ATTCAACTGG GGGCCCCGGG ACGTAGTCGG CAGGGAGTAC
ATCGCGGAGG TGCTCTATCC CGACGTCTAC GCCTTTGACT GGCGGGGAGA TCTAGAGCGC
CTAGGAGATA TGTACGGCGT GTCTATCCCG CCGCAGACCT ACGCCGTGTA CAACATAAAC
TGGAAGGAGG TGGTAGACCT GGCGGGGAAC GTGGTTAAGA TCCCCAGCAG GGTGGAGAGG
TTTGCCACTT TTGTCGCATA TCAACTCCCC ATCGCCTTCA ACGTCACCTC TAGGCTCGTC
GCCGTGGGGA GAGACGCTGT CCAAGGCGTC TTCGCCCCTC TGATGAAGGC GGCTTTCCCC
GCCGTGGTAA ATCTGCCGAC GCCTGGAGAT CGCTTCAAGG TAAACGTCGA AGCTCTCGTC
CAGCTGAAGC CGCAGGTGGT GTTTAACTGG GCGGTAAACC CCGACGACGT AAGAACAATG
CAGAGGGCTA ACCTAACCCT GGTACAGGTG GTGGTTAACA ACTTCACAGA CGCCGAGAGG
CTCGTCTGGC TATACGGCGT GGTCTTCGAC AGATTGCCCA GGGCTAGACA GATCGTCAAC
GACATGGAGG ACATAGTGAA GTTTGTCGCC AACAGAACCG CGTCGGTGAG AGAAAAGGCG
AGGGTCCTAT ACCTCTGGGT AGACCCGCTG ACGGTGGCGG GAGGCGCCTC CCTCTTTAGC
CAAAACATAG AGCTGGCGGG CGGGGTAAAC GTAGCCGCGG CCGACTACCC CACCATGAAC
ACCGTGAAGG TGGACCCCGA GCGGATACTT AAGTGGAACC CAGACGTGAT AATCATCGCC
TGGCAGGCGA GATACAACGA GTCTGCCGTC TTGAACAACC CGGTATACCG CGGGGTAAAC
GCCGTGAAAA ACGGCAGAGT ATACAAAAAA CCCATCCTCT CAGAGATGAC CCCGGACGCC
GCCCTCTCGG TGTTGTGGAC AGCCACAAAG CTCTACCCAG ACCTCTTCAG AGACGTAAAC
TTCACCAAGG TAGCCGACTA CTACTACAGG AGGTGGTACG GCGTATCCTA CACACAGGTC
TGGGGGTAA
 
Protein sequence
MKWKIISLLV VILAAIAAVY LLLPKGPSPA QTAPTAAVSP TASPTAVATQ PPAQTPAVSR 
QIVVVDFRGK RIVLPKPPER IVVLNSYWAE VLVALGAGDK IVGIGRYVDA DEYLPPEVRK
KPVVGDLFGG VNVEAVVALK PDVVVTDYGY GKADEVIKRL EEAGVPVVAL FMRGTPDELR
AVEVLGNLTG AVDKARELEA FMAKRFEELR AGAAKIKERK RAVLIFGSSI LAGGPLSLAA
NSSFGMALVE AGAVNMALEQ FPNQAWPKID METLIRWDPD VVLIAASAED AGRIFDKIRS
DERWRVLKAY KNGEIYLVPW GSKIGDIFNW GPRDVVGREY IAEVLYPDVY AFDWRGDLER
LGDMYGVSIP PQTYAVYNIN WKEVVDLAGN VVKIPSRVER FATFVAYQLP IAFNVTSRLV
AVGRDAVQGV FAPLMKAAFP AVVNLPTPGD RFKVNVEALV QLKPQVVFNW AVNPDDVRTM
QRANLTLVQV VVNNFTDAER LVWLYGVVFD RLPRARQIVN DMEDIVKFVA NRTASVREKA
RVLYLWVDPL TVAGGASLFS QNIELAGGVN VAAADYPTMN TVKVDPERIL KWNPDVIIIA
WQARYNESAV LNNPVYRGVN AVKNGRVYKK PILSEMTPDA ALSVLWTATK LYPDLFRDVN
FTKVADYYYR RWYGVSYTQV WG