Gene Tneu_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0166 
Symbol 
ID6164791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp148787 
End bp149524 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID641667332 
Producthypothetical protein 
Protein accessionYP_001793569 
Protein GI171184650 
COG category[S] Function unknown 
COG ID[COG1836] Predicted membrane protein 
TIGRFAM ID[TIGR00297] conserved hypothetical protein TIGR00297 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGC AGATAGTGGC TGTTCCATCC ATCGTCGTCC TCGCCCTTTT GGCCCTGAGG 
AAGGGCTTCC TCACCGTCAG GGGCACCGTC TCGGCCATCG CCGTAGGAAC AGCCGTGGCC
GTTGCCCACC TCGGCCTCTT CGGCCTAACG GCGGCGTTCT TCCTCACCTC CTCGCTTCTC
ACAAAGCTAC GGGCGGAGTG GAAGCTGGAG AGAGGCCTCA AGGACGTGTC CGGCCGCTCG
CTGAGGCAGG TTTTTGGAGT TGGGGCGCCG ATCGCGGCCT TCGCCCTGGC CTACCTGGCC
TCGGGAGATG TGAGGTTGCT CGGCGCCGCC GCGGTGGCGG TGGCGGCGGC TACCGCCGAC
ACGTGGGCGA GCGAAGTGGG GGTGGCGTAT GGCGGAACGC CTAGGTACAT CCTAGCCCCG
TGGAGGCGGG TGGAGCCCGG CACGTCGGGC GGCGTGACGC CTGTAGGCGT TGCGGCGTCG
GCGGCGGGCG CTCTCGCCAT GGGGGCACTG GCCCCTCTCC TGGGGATACA GCAGCCCTTT
TGGAAGATAG CCCTATTTGG CTACCTCGGC GAGCTTCTAG ACAGCGTCCT AGGGGCGTCG
TTGCAGGTGA AGTATATATG CGGCGGCAGG ATATCGGAGC AGCCGGCGGC TGGATGCAGA
AGGAGGGGCT TTCTCACGAA CGAGGCGGTT AACCTAGTAA GCGGCTTCGC CGTGGGGCTG
CTCTACCTCA TAACTTAA
 
Protein sequence
MEPQIVAVPS IVVLALLALR KGFLTVRGTV SAIAVGTAVA VAHLGLFGLT AAFFLTSSLL 
TKLRAEWKLE RGLKDVSGRS LRQVFGVGAP IAAFALAYLA SGDVRLLGAA AVAVAAATAD
TWASEVGVAY GGTPRYILAP WRRVEPGTSG GVTPVGVAAS AAGALAMGAL APLLGIQQPF
WKIALFGYLG ELLDSVLGAS LQVKYICGGR ISEQPAAGCR RRGFLTNEAV NLVSGFAVGL
LYLIT