Gene Tneu_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0141 
Symbol 
ID6164666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp129355 
End bp129885 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID641667307 
Producthypothetical protein 
Protein accessionYP_001793544 
Protein GI171184625 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0775358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCAGA TCGCGGTCGC TGTACACAGC AACCACGTGC CCGGCCTGGG GGAGAAGGCC 
AGGCTTTTTG TACATGCGTT GGCGGAGAGA TACCCAGACG CGGTTCTGTT GGTAGGCGGC
TACTGGGGGC ACATGAAAGA CGTCGTAGAC GCCGCCCTAG AGAGAGGTCT GAAGGTCGTC
GTCTTTCTAC CCACGGAGAG GGAGGATGTG CCGTTGCCGC CGCAAGTCGT GGCGGTGAGA
ACGGGGTGCG AGTTCAGATG CAGATCTGTG ATGATGGTCC GCTCCGCCGA CGCGGTGGCG
GTCCTGGGGG GAGGTGTAGG GACCGTAATC GAGGCGTTTA TGGCCTACGC GATGGGGAAG
CCCCTCTACG TGTTGACGGA GACCGGCGCC GCCAGCGACA GGTTGCCGCA GGCCTACCCG
GAGTACTTCG ACGAGAGGAG GGCGGTGAAG GTGGAGTATT TGAGGGATCC GAAGGCGCTG
GCGGAGGAGG TCTGCGGCGC GGAACCCGGC GCCTCAACCG CCTTTGGTTA A
 
Protein sequence
MRQIAVAVHS NHVPGLGEKA RLFVHALAER YPDAVLLVGG YWGHMKDVVD AALERGLKVV 
VFLPTEREDV PLPPQVVAVR TGCEFRCRSV MMVRSADAVA VLGGGVGTVI EAFMAYAMGK
PLYVLTETGA ASDRLPQAYP EYFDERRAVK VEYLRDPKAL AEEVCGAEPG ASTAFG