Gene Tneu_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0088 
Symbol 
ID6165597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp77432 
End bp78247 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content64% 
IMG OID641667255 
Productcompetence damage-inducible protein A 
Protein accessionYP_001793492 
Protein GI171184573 
COG category[R] General function prediction only 
COG ID[COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.747767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.181951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAG GCGCGGCTTG GATCGTCACC GTGGGAAACG AGCTACTTAT AGGGAGGGTG 
GTGAACACAA ACGCGTCGTG GCTAGCCGGC AGGCTCACCT ACCTGGGCTA CGCCGTGAGG
CGCATCGTGA CGGTCCCAGA CGTGGAGGAG GACATAGCCG AGGTCTTTAG AGAGGCCCTG
GCTAGGGCAG ACGTGGTCGT CTCGACGGGC GGCCTCGGGC CGACGCCAGA CGACATAACC
AACATAGCCT TCTGCAGAGC CCTGGGGGTC GATCCTGCGG TGAACGAGGA GGCCTTGAGG
ATGGTCGAGG AGAGGTACAG ATCGCGGGGG TACCCCCTCA CGCCGGAGAG GGTCAAGATG
GCCCAGATGC CTCCCGGCGC GAGGCCGCTG CCAAACCCAG TGGGGACGGC CCCCGGGGTC
CTATACGAGG CGGGTGGGAA GGTGGTGGTT CTCCTCCCAG GTGTCCCAAG GGAGATGGAG
GCCATCTTCG AGGGGTACGT AGAGCCTCTT CTCAAGTCGC GGGGGCCTCC CGTGTTTTTC
GCCGAGAGGG GGCTGGAGGT TAGGGGCGTG CCCGAGGCCG ACGTTGCGCC TATTATTCGG
GAGGTGCTAC GGCTAGACCC GAGGATATAT GTGAAATCTC ACCCAAGGGG CCGCGAGGTG
GAGGCCCCGC TCTTGTACAT CCACGTCTAC GCCAGCGCGT TCGACAGAGG CGAGGCGGAC
AGGCTTGTGG ACGCCGCCGT GGGGAGGCTC GTCCAGTTGC TGAAGGCCAG GTTCGGAGGC
GCCGTCTCTA TATCGGAAGA GCGCCGGCTA GCTTGA
 
Protein sequence
MHKGAAWIVT VGNELLIGRV VNTNASWLAG RLTYLGYAVR RIVTVPDVEE DIAEVFREAL 
ARADVVVSTG GLGPTPDDIT NIAFCRALGV DPAVNEEALR MVEERYRSRG YPLTPERVKM
AQMPPGARPL PNPVGTAPGV LYEAGGKVVV LLPGVPREME AIFEGYVEPL LKSRGPPVFF
AERGLEVRGV PEADVAPIIR EVLRLDPRIY VKSHPRGREV EAPLLYIHVY ASAFDRGEAD
RLVDAAVGRL VQLLKARFGG AVSISEERRL A