| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0027 |
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| Symbol | |
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| ID | 6165001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 19322 |
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| End bp | 20806 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641667192 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001793431 |
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| Protein GI | 171184512 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00644516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTGGACT TTAGACTCGA CTCCTGCAGG GGGGCGGTCG TTGAGGAGTA CCCCTCCGAG
GGGGCCCGCA TCCAGATATA CAGGTCTGAA GACGGGTACT GCTACAACGT GGCGTACGCC
TTCCCCTACT CGGAGAAAGT GGGCGAATAC GCCTACAAGG TGGTGGAGTA CCTCACGGCC
AACCAGATAA TTAGGCCTAA CCTCACCAGG GAGGAGCTCG GCAAACTTAT CGAGATGGCC
ATGGCGGACA TTGGGGTTCC GAGGCAGCTA CGCGCCGCCG TGAGGTACTA CGTCCAGCTC
GAGGCCGCCG ACTACTCCTA CCTCACGCCG ATTCTCTACG ACATAAAGCT GGAAAACGTG
AACATAAACG GCACAGACAG CCCCATCTAT GTGGATCACA GAGACTACGG CTACAACGTG
AAGACCAACG TGATACCTAC AAACAAGGAG ACCCTGATCA AGGTCATAGG GAGGGTCTAC
GCGGAGACCG GCCGCCCGCT GAACGAGCAG TACCCCATAC AGGATACGTA CATACGCCTC
AGAAACGGGG CGCTTCTGCG CTTCGCCACT GCGATGTCTG GCAGAGTGGC GAGAAACCCG
CCCTACGTAT CCGTCCGTAT ACAGCCTCCG CACCCCATAT CGCCCACCGA GCTGATAAAG
AGGCGCACCA TCTCCGCCTT AGCGATGGCC TATCTATGGT ACCTATTCGA GCACCACAAG
TCGGTGATGG TTGTTGGCGG CACCGGCACG GGCAAAACGA CGTTGCTAAA CGCGTTGCTC
GTCCTTCTGC CCCACAAACG CCTCGCCATA GCGGAGGAGA CCCCCGAGAT CAGGATGCCT
CCTAGCTACC AGAACGTGGT TATGCTTTTC ACATCGCCGA TGTACGACTA CATGAAGAAC
CTGCCCGGGT CGGAGTCCGC GATATACCTA ATAGACCTCG TCAAGTATCT GCTCCGCGCG
AGACCTGACA TCATCGTCAT AGGCGAGAGC CGCGGCAGAG AGATCCACGA GCTGATACAG
GGAGTCTTGA CGGGCCACGG CGGCGCCACC ACCTTCCACG CCGAAGACAT AATGGAGGTG
TTTATGCGTC TCACAGGAGA GGCCATGGGG GTATCCTCGG AACACATATC CGCGTTCCAC
GTGACGGCCA CGATAAAGAG GTTCGAGTTC GGCAGAAGGG TCACCTCCAT CACCGAGGTC
GTCTGGCTCA GGGCGTATCC ATACGCCGCG CCGGGCAAGA TAAAGATCAA GGAGGAGGAG
TTCGGGCTTA TAAACGTGGG CTGGTACGAC CAACGTAGCG ACACAGTAGA GGTGGATCTG
AGGCGGTCCT ACTGGCTTCA GAAGCTCGGC GGCTATGACG AAATAGCGGA GAGGGCTAAG
TTCCTCACGT CTCTGGTGGA GCGGGGGGTC TTCGACGCCG AAAAGGTGGG CGAGGCGGTG
AGGGAGTACT ACAGGCAGAA ACATGCTCTA CTACGGAAGG CCTGA
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| Protein sequence | MLDFRLDSCR GAVVEEYPSE GARIQIYRSE DGYCYNVAYA FPYSEKVGEY AYKVVEYLTA
NQIIRPNLTR EELGKLIEMA MADIGVPRQL RAAVRYYVQL EAADYSYLTP ILYDIKLENV
NINGTDSPIY VDHRDYGYNV KTNVIPTNKE TLIKVIGRVY AETGRPLNEQ YPIQDTYIRL
RNGALLRFAT AMSGRVARNP PYVSVRIQPP HPISPTELIK RRTISALAMA YLWYLFEHHK
SVMVVGGTGT GKTTLLNALL VLLPHKRLAI AEETPEIRMP PSYQNVVMLF TSPMYDYMKN
LPGSESAIYL IDLVKYLLRA RPDIIVIGES RGREIHELIQ GVLTGHGGAT TFHAEDIMEV
FMRLTGEAMG VSSEHISAFH VTATIKRFEF GRRVTSITEV VWLRAYPYAA PGKIKIKEEE
FGLINVGWYD QRSDTVEVDL RRSYWLQKLG GYDEIAERAK FLTSLVERGV FDAEKVGEAV
REYYRQKHAL LRKA
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