| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_4055 |
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| Symbol | |
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| ID | 7873283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 4454907 |
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| End bp | 4455587 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643700987 |
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| Product | two component heavy metal response transcriptional regulator, winged helix family |
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| Protein accession | YP_002891010 |
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| Protein GI | 237654696 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATCC TGATCGTCGA AGACGAAGTG AAGACCGGCG ACTACCTGCG CCAGGGCCTG
ACCGAGGCCG GATTCGTCGT CGATCTCGCG CGCGACGGCC TCGATGGACT TCACCTCGCG
CTCAGCGGCG ACTACGACCT CATCGTGCTG GACGTGATGC TGCCGTCGCT GGACGGCTGG
GCCATCCTGC AGACACTGCG TCGCAGCGGT CGCGAGAACC CGGTGTTGTT CCTGACCGCC
CGTGACCAGA TCGAGGACCG CGTTCGTGGC CTCGAGCTTG GCGCCGATGA TTACCTGGTC
AAGCCCTTCG CATTCTCCGA GTTCCTCGCC CGGGTCCGCA CCCTGCTGCG CAGGGGGCGG
AGCCATGAAC CGGACACCCT GCGCTCGGCG AATCTCGAAC TGGATCTGCT TCGCCGCCGC
GTGACGCGCT GCGGGCAGCG CATCGACCTG ACCGCCAAGG AATTCGCCCT GCTCGAACTG
CTGCTGCGGC GCAAGGGTGA AGTGTTGCCG CGCTCCTTGA TCGCCTCCCA GGTGTGGGAC
ATGAACTTCG ACAGCGACAC CAATGTGATC GAGGTCGCTG TACGCAGGCT GAGGGTGAAG
GTCGACGACC CCTTCGAGCC CAAGCTGATC CGCACCGTGC GCGGCATGGG CTACGTGCTC
GAAGCGATGG AGCCGAGCTG A
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| Protein sequence | MKILIVEDEV KTGDYLRQGL TEAGFVVDLA RDGLDGLHLA LSGDYDLIVL DVMLPSLDGW
AILQTLRRSG RENPVLFLTA RDQIEDRVRG LELGADDYLV KPFAFSEFLA RVRTLLRRGR
SHEPDTLRSA NLELDLLRRR VTRCGQRIDL TAKEFALLEL LLRRKGEVLP RSLIASQVWD
MNFDSDTNVI EVAVRRLRVK VDDPFEPKLI RTVRGMGYVL EAMEPS
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