| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_4017 |
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| Symbol | |
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| ID | 7873663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 4414948 |
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| End bp | 4417155 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643700954 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002890977 |
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| Protein GI | 237654663 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.649623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCG CCGAAGCAGG CCCAGCCCCC GAAGTCTTCC GCCCGCCGGT GTCGAGCGTG
CTCGCGCTCG ACTTCCAGCA GCTCAAGACC AAGCTGCAGA CCTACCTCCG GCCCGAGGAC
GTGGGCCGCG TCGAGGCGGC CTACCACTTC TCCGCCGATG CCCACGCCGG CCAGTTCCGC
GTCAGCGGCG AGCCCTATGT CAGCCACCCG GTGGCGGTGT GTTCGCTGGT CGCCGACTGG
CACCTCGACC CGCAGGCGCT GATCGCCGCG CTCCTCCACG ACGTGATGGA GGACACCCAC
ATCACAAAGG CGGAGATCGC CGAGCGCTTC GGCAAGGTCT CCGCCGAACT CGTCGACGGC
CTCTCCAAGC TCGACAAGAT CGAGTTCCGC TCGCAGGAAG AGGCGCAGGC GGAGAACTTC
CGCAAGATGC TGCTGGCGAT GGCGAGCGAC CTGCGCGTCA TCCTCATCAA GCTCGCCGAC
CGTCTGCACA ACATGCGCAC GCTGGACCAC ATGCGTCCGG CCAAGCGCCG CCGCATCGCC
AACGAGACGC TCGAGATCTA CGCGCCGATC GCCAACCGGC TCGGGCTCAA CGACCTCTTC
CGCGAGCTGC AGGAGCTGTC CTTCCGCAAC AAGTACCCGC TGCGCTTCGA GGTGCTCGCC
AAGGCGATCC GCTCGGCGCG CGGCAACCGC CGCGAGGTGG TCGGCAAGAT CCTCGCCAGC
ATCGAGGAGC GCCTGCCGCA GTGGGGCATC GCCGCCGAGG TGCAGGGGCG CGAGAAGCAC
CTCTACGGCA TCTACCGCAA GATGGTCGAG AAGCACCTGT CCTTCTCGCA GGTGCTCGAC
ATCTACGGCT TCCGCGTCAT CGTCAAGGAC GTGCCGAGCT GCTACCTCGC GCTCGGTGCG
TTGCACTCGA TGTACAAGCC GGTGCCGGGC AAGTTCAAGG ACTATCTGGC CATCCCCAAG
GCCAACGGCT ACCAGAGCCT GCACACCACC CTGATCGGTC CCTTCGGCAT GCCGGTCGAG
GTGCAGATCC GCACCCGCGA GATGCACCAC ATCGCCGAGA CCGGCGTGGC CTCGCACTGG
CTGTACAAGG AAGACGAGAA GACCCTCACC GAGCTGCAGC AGAAGACGCA CTCCTGGCTG
CAGTCCCTGC TCGAGCTGCA GTCGGCCTCG GGCGAGGCCA CCGAGTTCCT CGAGCACGTC
AAGATCGACC TCTTCCCCGG CGAGGTCTAC GTGTTCTCGC CCAAGGGCAA GATCTTCTCG
ATGCCCAAGG GCTCGACCCC GGTCGACTTC GCCTACGCGG TGCATACCGA CGTCGGCAAT
CGCTGCGTTG CCTGCCGCAT CAACGGCGAC CTGATGCCGC TGCGCAGCGA GCTGCGCAAT
GGCGACCAGG TCGAGATCAT CACCGCGGCC CACGCCAACC CCAACCCGGC CTGGCTGTCC
TACGCGCGCA CCGGCAAGGC GCGCGCGCAG ATCCGCCACT TCATGAAGAA CGCGCAGCAG
GACGAGTCGG TCACGCTCGG CGAGCGCCTG CTCAACCAGG CGCTGCGCCC GCACGGGCTC
ACCCTCGGGC AGATCTCCAG CTTCGCCTGG GACCGCTTCC TGCGCGACCG CGGCGTGCGC
CACAAGAAGG AGGTCTTCTC CGACCTCGGG CTCGGCAAGC GCCTGCCGGT CATCGTCGCG
CGCCGCCTCG CCGAGGCGCA GGACCTCGAG TCCGGTCGCC CGGACGTGGT CAAGCCCAAG
CCGGCGGGGG CGATCAGCAT CCGCGGCTCG GAAGGTGTGG CGGTGCAGCT CGCGCGCTGC
TGCCATCCCA TCCCGGGGGA CCCGATCATC GGCACCCTGC GCAAGGGCCA GGGCCTCGAA
GTCCACACCC ACGACTGCCC CAACGTGGCC AAGCTGCGCG GCGACCGCGG GCGCTGGGTG
GATGTCGAGT GGGAGCACAT GGTCGACGAC CGCCTGTTCG ACGTCGGCAT CCGCGTGCTC
AGCCACAACG CCTGCGGCGT GCTGGCGCGG GTGGCGAGTG CGATCGCCGA GGAGGACAGC
AACATCCAGA GCGTCAGCAT GGATGGCGGA CAGGGCGAAT ACACCGCGCT CAACTTCACC
GTGCAGGTGC ACGACCGCAT GCACCTGGCG CGCGTGATGC GCGGCGTGCG CAGGGTGCAG
GAAGTGGTGC GCATCGGACG CGTCAAGGCC GACGGCCGCG TCGGCTGA
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| Protein sequence | MKAAEAGPAP EVFRPPVSSV LALDFQQLKT KLQTYLRPED VGRVEAAYHF SADAHAGQFR
VSGEPYVSHP VAVCSLVADW HLDPQALIAA LLHDVMEDTH ITKAEIAERF GKVSAELVDG
LSKLDKIEFR SQEEAQAENF RKMLLAMASD LRVILIKLAD RLHNMRTLDH MRPAKRRRIA
NETLEIYAPI ANRLGLNDLF RELQELSFRN KYPLRFEVLA KAIRSARGNR REVVGKILAS
IEERLPQWGI AAEVQGREKH LYGIYRKMVE KHLSFSQVLD IYGFRVIVKD VPSCYLALGA
LHSMYKPVPG KFKDYLAIPK ANGYQSLHTT LIGPFGMPVE VQIRTREMHH IAETGVASHW
LYKEDEKTLT ELQQKTHSWL QSLLELQSAS GEATEFLEHV KIDLFPGEVY VFSPKGKIFS
MPKGSTPVDF AYAVHTDVGN RCVACRINGD LMPLRSELRN GDQVEIITAA HANPNPAWLS
YARTGKARAQ IRHFMKNAQQ DESVTLGERL LNQALRPHGL TLGQISSFAW DRFLRDRGVR
HKKEVFSDLG LGKRLPVIVA RRLAEAQDLE SGRPDVVKPK PAGAISIRGS EGVAVQLARC
CHPIPGDPII GTLRKGQGLE VHTHDCPNVA KLRGDRGRWV DVEWEHMVDD RLFDVGIRVL
SHNACGVLAR VASAIAEEDS NIQSVSMDGG QGEYTALNFT VQVHDRMHLA RVMRGVRRVQ
EVVRIGRVKA DGRVG
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