Gene Tmz1t_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3986 
Symbol 
ID7873632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4383969 
End bp4385372 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content64% 
IMG OID643700923 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_002890946 
Protein GI237654632 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCA TTCACTCGCT GACGGCGAGA CTGGCAACAC TATTTGCCGT CCTCGCTGCG 
AGCCTGCTTG TGCTGGCAGC GATGCTCTTT GGGCGCATGT TGGACATGCA TTTCCAGGAG
CTGGACATGC ACGAGTTGCA GGGCAAGGTC ACGCTCATCC GCAACGCGCT GCAAAGTGTT
GATGCGACTG GGGGGCGATC GGAACGCATT GAGGCGCTCG AACGCTCCTT CGTTGGACAT
GAAAGTGTCG GTGTCCTGGT TCGCGACGTC GAGGGACGCG TCCTGTACAT CATCCATCCC
GAGCATTTCA CCGCCTCCCA GCGGGCAGGC GAACCCCTTT CACGCGCGTT AACCGACTGG
ACCGTGGATG AGCGCCCCCA TCGAGGGCTC GAGGTCAGCA TCGCGCTACC GAGCCTTGGG
GCGAAGGAGC AGACGATCGA GGCGCTGGTC GCAGTGGATC TGTCGCATCA CGTCCACTTC
CTCGCGTCGG TACGTCATGC AACTTGGGCG GGCGTCTTCG TCGCTGCCTT GGCGGCGGCG
CTATTCGGCT GGTTTGCTGC GCACCGGGGC CTCGCCCCCC TGCGTCGGGT CACCGAAACT
GCCCGTCGGC TGTCGGCAAG GCAACTCGGC CAGCGTCTCG CCATCGATGA TGCGCCGCTG
GAAGTGCGCG ACCACGTCGA AGCCTTCAAT GGCATGCTCG CTCGGCTCGA AGCCGCTTTC
CAGCGGCTCG GCGATTATTC GGCGGATATA GCCCACGAAC TGCGTACGCC GATCTCGAAC
CTGATGACCC AGACCCAGGT CGCGCTGTCG CGGCCGCGCA CGCTCGACGA ATACCAGGAC
ATCCTGGCCT CGAACCTCGA GGAATACGAG CGCATCGCGC GCATGGTCAG CGACATGCTG
TTCCTCGCCA AGGCCGACGA GAACACCCTC GCGCACGCGG GCGAGGCGAT CGACCTGGCC
CGCGAGGCAG ACGCACTGAT CGACTTCTAC GAGGCGCTGG CCGACGAGCG CCAGGTCCGC
ATCGTGCGCC AGGGCCAAGC GAGCGTTCAG GGTGATCGCC TGATGCTGCG GCGCGCGCTG
TCGAACCTGA TCTCGAATGC GCTTCGTCAC ACACCGAAAG AGGGGCAGAT CACGATCAGG
ATTGACGCGG ACGCAGCCGG CGTCCGTCTC GCCGTCTCTA ATGTCGGCGA CCCGATACCC
GCCGATCAGA TCGAACGGAT CTTCGAACGC TTCCATCGCG GTAGCGCCCA GCGCGAATCT
CGCGGTGAAG GCGCAGGGCT CGGACTCGCG ATCACGCGTT CCATCGTCCA GGCCCACGGG
GGTCACATCA CTGCGCGCTC CGCTGAAGGT GTCACCTGCT TCACGATAAC CTTGCCTCGC
AATGAAGCCT CATCGCCTTC CTGA
 
Protein sequence
MIRIHSLTAR LATLFAVLAA SLLVLAAMLF GRMLDMHFQE LDMHELQGKV TLIRNALQSV 
DATGGRSERI EALERSFVGH ESVGVLVRDV EGRVLYIIHP EHFTASQRAG EPLSRALTDW
TVDERPHRGL EVSIALPSLG AKEQTIEALV AVDLSHHVHF LASVRHATWA GVFVAALAAA
LFGWFAAHRG LAPLRRVTET ARRLSARQLG QRLAIDDAPL EVRDHVEAFN GMLARLEAAF
QRLGDYSADI AHELRTPISN LMTQTQVALS RPRTLDEYQD ILASNLEEYE RIARMVSDML
FLAKADENTL AHAGEAIDLA READALIDFY EALADERQVR IVRQGQASVQ GDRLMLRRAL
SNLISNALRH TPKEGQITIR IDADAAGVRL AVSNVGDPIP ADQIERIFER FHRGSAQRES
RGEGAGLGLA ITRSIVQAHG GHITARSAEG VTCFTITLPR NEASSPS