Gene Tmz1t_3869 details

Gene Information

• Locus tag: Tmz1t_3869
• ID: 7874110
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 4263562
• End bp: 4265412
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643700811
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_002890834
• Protein GI: 237654520
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGGCT TGAACCTGAT CGACGTAATC TGGCCGATGA TGGCCGCCAC CAGCTTGACG 
CTGGCGGTCA TCTTTTTCTT CATCTGGATT CACCTTCGGG CCCAGCGCGA TTACCTGGCT 
TTCGCCCTGT TCGCCGTCTG CGTCTGGTTT TACACGTTCG GCGAGTGGTC GCTGATGCGG 
GCGACGACGC CCGAGGCCTA CGGCGACACC CTGCGCTGGA TGATGGTCGT GGTCCCGATC 
GGGGTCATCC TCCTGGCCGC GTTCATCCGC TGGCACCTGC GCGCAGGCCG CGACTGGCTG 
TTCTGGAGCG TCTGCGGCCT GCGGCTGCTC GGCATCCCGC TCAACTTCCT GTTCGGGGCC 
AATGTCGTCT ATTCGGAGAT CACCGAGCTC CAGCAACAGG CGACCATGTT CGGCGACAGC 
ATCGCCATGC CGGTCGGCGT CCCGGGGCCC TTCCACTGGC TGGTCAACAA CCTCGCCGAC 
ATCCTGCTGG TCCTCTTTCT CGCCGACGCA ACCCATTCCG CCTGGCGCCG CGGCGACGCT 
CTGACCCGGC GGCGCGCCCT TTTGGTCGGT GGCGGCACCA TCCTGTTCTT CCTCATCGCC 
GCGGGCCATG CCACGCTGCT GCACGCCGGA CTGGCATCCT CGCCATATCT GATCAGCATC 
AGCTTTCTCG GCATCGTCCT GGTCATGTCC TATCAGCTGG GCTTCGATGT CTTCCGCTCG 
GTGCACCTGG CCATCCAGCT GCGCGAGAGC GAACAGCGGA TGGAGCTGGC CGTCCATGCC 
GCGCGCCTCG GGCTCTGGGA ATGGGACATC GAGCGCGACG TCTTCTGGGC CAACGACACC 
GGCTATGCGA TGTTTTCCTT TCTGCCCGGC GAGCGCGTGG ACTTCGACAG GTTCAGCCAG 
CGCATCCATC CCGAGGAGAG AGCCGCAGTC GTCACCGCCG TCCACGATGC CCTCGCCAAC 
CATCGCCGCT ACGAGAAGGA ATACCGCATC GTCCTGCCCT CCGGCGACAC CCGCTGGATG 
CACGCCTGGG GGCAGGCCGA ATACAGCGCC AGCGGCAAGC CGACCAAGCT GCTCGGCGTC 
GTCCTCGATG CCACCGAGCG CAAGCTGGCG GAGCAGCGCC AGGACGAGAT CGAGAGACTG 
GCCAACCGCC AGCGCGACGA ACTCGCGCAC CTGTCGCGCG TCGCCATGCT GGGCGAGCTT 
TCCGGCGCTC TCGCCCATGA GCTGAACCAG CCGCTGACCT CGATCCTCAG CAATGCCCAG 
GCGGCCCAGC TGTTCATCGC CCGCGGCGTG GTGAGCGCCG ACGAGATCGG CCCCATCCTC 
GACGACATCG TCAAGGCCGA CCGCCGTGCC GGCGACATCA TCCGGCGCCT GCGGCGGTTG 
CTAAAGAAGG ACGACTCGAC GCGGCAGTGG CTCGACCTCA ACGAGGTGGT CAGCGAGGTC 
CTGCGGCTGA CCAACAGCGA CCGCGTTTCC CGCGGGATCA CCATCAAGCT CGAGTTGTCG 
CCGGACCTGC CTCCTGTCTA TGGCGACGAG GTGCAATTGC AGCAGGTCCT CCTGAACCTG 
CTGAACAACG CCTGCGATGC CATCGAGGCC GTCGACGCGC TGCCGGCGCT GACCGTCCGC 
ACCGTATGCG AGGCCGGCAA CGTCATCGTC TCCGTGGCCG ACCGCGGCAG CGGCATCGGC 
GCCGAGGACA TGGAGCGCAT CTTCGAGCCC TTCGTCACCA CCAAGGCCAA GGGCCTGGGC 
TTGGGCCTGT CGATCTGCCG GACCATCATC CAGGCTCACG GCGGCCGGCT CTGGGCTGAA 
AACCGGCAGG ACGGCGGCGC GGTCTTCCAC TTCGTGGTGC CTGTCGCGTG A 

 

Protein sequence

MPGLNLIDVI WPMMAATSLT LAVIFFFIWI HLRAQRDYLA FALFAVCVWF YTFGEWSLMR 
ATTPEAYGDT LRWMMVVVPI GVILLAAFIR WHLRAGRDWL FWSVCGLRLL GIPLNFLFGA 
NVVYSEITEL QQQATMFGDS IAMPVGVPGP FHWLVNNLAD ILLVLFLADA THSAWRRGDA 
LTRRRALLVG GGTILFFLIA AGHATLLHAG LASSPYLISI SFLGIVLVMS YQLGFDVFRS 
VHLAIQLRES EQRMELAVHA ARLGLWEWDI ERDVFWANDT GYAMFSFLPG ERVDFDRFSQ 
RIHPEERAAV VTAVHDALAN HRRYEKEYRI VLPSGDTRWM HAWGQAEYSA SGKPTKLLGV 
VLDATERKLA EQRQDEIERL ANRQRDELAH LSRVAMLGEL SGALAHELNQ PLTSILSNAQ 
AAQLFIARGV VSADEIGPIL DDIVKADRRA GDIIRRLRRL LKKDDSTRQW LDLNEVVSEV 
LRLTNSDRVS RGITIKLELS PDLPPVYGDE VQLQQVLLNL LNNACDAIEA VDALPALTVR 
TVCEAGNVIV SVADRGSGIG AEDMERIFEP FVTTKAKGLG LGLSICRTII QAHGGRLWAE 
NRQDGGAVFH FVVPVA