Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3851 |
Symbol | |
ID | 7874093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 4249339 |
End bp | 4251243 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643700793 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_002890817 |
Protein GI | 237654503 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0571122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCC TCGAACACAT TCCCCTGAAC GGCGAACTCC CCAGTCCGAA AGGAGTCGCG CTGGCGATCC TCGAACTGTG CCGCAAGGAC GACGCCACGA TCGCCGAAGT GGCGCGCATC GCGCAGACCG ACCCGGCGCT GGCGAGCCGC CTGATTCGCC AGGCCAACTC GGCGGCGCAC GGCGGCGGGC GACCGGTGGC CTCGGTCACC GAGGCAATCA TGCGCCTGGG TATGGGCACG GTGCGCAACC TCGCGCTCGG CTTCTCGTTG GTGGACCAAT ACCAGAACGG GCCCTGCGGA CAATTCGACT ACCAGGGCTT CTGGTCGCAC TCGCTGCTGA TGGGGCTGGC GATGCAGAAG TTCAGCAACA TGACGGGGGC CGGCGCGAGC GAGGAGCTCT TCGCCTGCGG CCTGCTCGCC CAGGTGGGCC GGCTCTCGCT CGCCACCGTC TATCCCGTCG AGTACGGCCG CCTGCTCGAC GGCCAGGACG GTGTGGCGCG CAACCTGGTG GCGCTCGAGC AGGAGCACCT GCAGACCGAC CACAACGAGC TCACCGCCGC GCTGCTCGGC GAGTGGGGCA TCCCCGGCGC GCTGATCGAG CCGATCTACC ACCACGAGGA GCCGGAGCAC TCCGGCTTCT CCACCGGCTC GCGCCCCTAC CAGCTCGTGC ACCTGTTCTA CCTCGCCCGC CGCGTCGCCG ACCTCGGGCT GGCCGGCGAG AACGAGCGCA ACGCCTGCAC CGCCGAATTG CTGCTGCTCG GGGGCAGGAT CGGCCTCGAC GCCGAGCAGC TCGGCGCCAC GGTGGACGAC CTGGTGCAGC AGTGGCGCAC TTGGGGCGAG CTGCTGCGCG TGCCGGCCTC GGCGCTGCCC TCGTTCGCGC ACATGTCGGC GGCGCACGCG ATGCGCGACG AGAAGAGCGA TGGCGCGGCG GCGCTGCGCG TGCTGCTGGT CGACGACGAC CCCACCACGC GCTGCATGAT GGAGGGCGTG CTGTCCGGGG CGCTCGGCCA CGCGGTGGTG TGCGCCAACA ACGGTCGCGA GGCGCTTGCG CTGGCGGTCG AGACCCAGCC GCAGATCGTC GTCACCGACT GGATGATGCC GGGCATGGAC GGGCTGGACC TCGCGCGTGC GCTGCGCGCG ACCGAGTGGG GGCAGACCAT GTACCTGATC ATGCTCACCG GGCATGAAAA CGAGGACGAG GTGAGCGAGG CCTTCGAGGC CGGGGTGGAC GATTTCCTGG TGAAGCCGGT CAACGTGCGC ACCCTGCGCG CGCGTCTGCG CGCCGCCCGG CACTACGTGC AGCTGCTCGA GGCGTGGGAG CGCGACCGTG CCCAGCTCAA GCAGTTCGCG GCCGAGCTGG CGATCAGCAA CCGCCGCCTC GCCCACGCGG CGATGACCGA CCTGCTCACC AACCTGCCCA ACCGCCGCTC GGGCATGAAC GCGCTCGCCA AGGCCTGGGC CGCCTCCAGC CGCTTCGAAC AGCCGCTGTC GGTGATGATG CTCGACATCG ACCACTTCAA GCGCATCAAC GACAGCCACG GCCACGCGGT GGGCGACACC GTGCTGCGCG ACGTCGCCCA GGCCATCCAG CAGTCGGCGC GCAAGGACGA CAGCATGTGC CGCATGGGTG GCGAGGAATT CCTCGTGATC TGCCCGAACA CCGACCTCAA GGCGGCGGTC CAGGCCGCCG AGCGCCTGCG CCGCATGGTC GAGCGCCTGC GCATCCAGGC CGGCGAAACG GAAATACAGA CCTCGGTGAG CATCGGCGTG GCCACCCGCG AGGTCGGCAT GACCGAGACC GACGCCCTCG TCAATGCCGC CGATCGCGCG CTCTACCGCG CCAAGCAAGC CGGCCGCAAC CGCAGCTGCG TGGTGGTGCA GGGGCAGATG CGGTGCTTTC CGTGA
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Protein sequence | MKTLEHIPLN GELPSPKGVA LAILELCRKD DATIAEVARI AQTDPALASR LIRQANSAAH GGGRPVASVT EAIMRLGMGT VRNLALGFSL VDQYQNGPCG QFDYQGFWSH SLLMGLAMQK FSNMTGAGAS EELFACGLLA QVGRLSLATV YPVEYGRLLD GQDGVARNLV ALEQEHLQTD HNELTAALLG EWGIPGALIE PIYHHEEPEH SGFSTGSRPY QLVHLFYLAR RVADLGLAGE NERNACTAEL LLLGGRIGLD AEQLGATVDD LVQQWRTWGE LLRVPASALP SFAHMSAAHA MRDEKSDGAA ALRVLLVDDD PTTRCMMEGV LSGALGHAVV CANNGREALA LAVETQPQIV VTDWMMPGMD GLDLARALRA TEWGQTMYLI MLTGHENEDE VSEAFEAGVD DFLVKPVNVR TLRARLRAAR HYVQLLEAWE RDRAQLKQFA AELAISNRRL AHAAMTDLLT NLPNRRSGMN ALAKAWAASS RFEQPLSVMM LDIDHFKRIN DSHGHAVGDT VLRDVAQAIQ QSARKDDSMC RMGGEEFLVI CPNTDLKAAV QAAERLRRMV ERLRIQAGET EIQTSVSIGV ATREVGMTET DALVNAADRA LYRAKQAGRN RSCVVVQGQM RCFP
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