Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3816 |
Symbol | |
ID | 7874058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 4211995 |
End bp | 4212561 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643700758 |
Product | hypothetical protein |
Protein accession | YP_002890782 |
Protein GI | 237654468 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.206129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACGA CCGCCGCACC GCTGGTGCGC AGCTTTGCCC CGCTGTTCCG CGCCGACGCG CGCGTGCTGG TGCTCGGTAG CATGCCCGGC ACGGCCTCGC TCGCCGCCGC GCAGTATTAC GCGCATCCGC GCAACGCCTT CTGGCCGATC ATGGGCGCGC TCTTCGGCGC CGGAGCGGAA CTCCCCTACG CGCAGCGGCT CGAGCGCCTC GCCGCCGCCG GCGTCGCGCT GTGGGACGTC ATCGGCCGCT GCGAGCGCGC CGGCAGCCTC GACAGCGCGA TCGCGCCCGA CAGCATCGAG GCCAACGACT TCGCCGGCCT CTTCGCCGCC TGCCCCGACA TCGGCCACGT CTTCTTCAAC GGCACCGCCG CCGAGACCGC CTTCCGCCGC CATGTGCGCG GCCGCATCGC GCTGCCGCCG CTGCACTTCA CCCGCCTGCC CTCGACCAGC CCGGCGCACG CCGCGCGCGG GCTGGAGGCC AAGCTCGCCG CCTGGCAGGT CGTGAAGGCG GCAGCGCACC GCGCGGCCGC AGCCCGCATC GACATCCCGG CCGCCCAGGC CGCCTGA
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Protein sequence | MSTTAAPLVR SFAPLFRADA RVLVLGSMPG TASLAAAQYY AHPRNAFWPI MGALFGAGAE LPYAQRLERL AAAGVALWDV IGRCERAGSL DSAIAPDSIE ANDFAGLFAA CPDIGHVFFN GTAAETAFRR HVRGRIALPP LHFTRLPSTS PAHAARGLEA KLAAWQVVKA AAHRAAAARI DIPAAQAA
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