| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3794 |
|---|
| Symbol | |
|---|
| ID | 7874036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 4184406 |
|---|
| End bp | 4185503 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643700736 |
|---|
| Product | glycosyl transferase family 4 |
|---|
| Protein accession | YP_002890760 |
|---|
| Protein GI | 237654446 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCC AGCTCCCCGT CCTCACCAAA ACCGCAGTGC TCGCCGTCGT GCCGCTGCTG
CTGACCCTGG CCGTGATCCA GGTGCTGATC AAGCCTGCCC GGCGCATCGG CCTGGTAGAC
CGCCCCGGCG GCCGCAAGGA GCACGACGGC GAAATCCCGC TCATCGGCGG CCTCGGCATG
GCAATCGCGC TCATCCTCAG CGTACAGCTC GCCGAACCCC AGACCCTGAT CGACCTCAAC
GTCCTCGGCG GCATCGCCCT GCTGGTCGTG GTCGGCGTAC TCGACGACTT CCTCGACATC
CGCGCCAAGA CCAAGCTCCT CGTCCAGGCC ATCGCAGCCA TGCTCATCGT GCTGCCGAGC
GGCGTCTACA TCACGCATGT GGGCGATATC CTGGGAATCG GGAACATCAG CCTCGGCCCC
CTGGCCCTGC CCTTCACCGT ATTCGCGGTC GTCGGCCTCA TCAACGCGGT CAACATGGCC
GACGGCGCCG ACGGCCTCGC GGCCGGCCTC ACCTCGACCA CCGTCGTCTG GTTCATCGCC
TGCGCCCTCG TCGTCGGCAA CCAGTCGATG GCCCTCGACC TCGTCATCCT GCTCGCCGTC
ACGGTCGGCT TTCTCTGCTA CAACATGCGC ACCCCACTGC GCCACAAGGC GGCCGTGTTC
ATGGGCGACG CCGGAAGCAT GATGCTGGGT GCGCTGCTGG CATGGTTCGC GATCCAGCTC
CCGCACAACA GCACCGCCGT ACCGCCACCT CCGCCCTTCG CGATCCTGTG GATGCTGGGG
TTGCCAGTGC TGGACACCGT GGTGCTGATG ATCCGCCGCA TGCTGCAGGG ACGCAGCCCG
TTCAGCGCCG GGCGGGATCA CATGCATCAC ATCTGGATGC ATGCGGGTTT TAGCCCGGGC
GAGACGACGT TGCTGTTGAT GCTGCTCAAC GCTCTGATCG GTCTGGTCGG TTTTGCAGGC
TGGCGTTCGG GTGTGCCGGA ATGGGCTCTG GCACTTGGTT ACGTTGGGCT GTTCGCGATA
CAGGCATCGA TCACCCAGCA TGCCTGGGTC GTCTCGAAGT GGCTCAAACG GCATCACTGC
GCACGAGCCC AGCAATAA
|
|---|
| Protein sequence | MLTQLPVLTK TAVLAVVPLL LTLAVIQVLI KPARRIGLVD RPGGRKEHDG EIPLIGGLGM
AIALILSVQL AEPQTLIDLN VLGGIALLVV VGVLDDFLDI RAKTKLLVQA IAAMLIVLPS
GVYITHVGDI LGIGNISLGP LALPFTVFAV VGLINAVNMA DGADGLAAGL TSTTVVWFIA
CALVVGNQSM ALDLVILLAV TVGFLCYNMR TPLRHKAAVF MGDAGSMMLG ALLAWFAIQL
PHNSTAVPPP PPFAILWMLG LPVLDTVVLM IRRMLQGRSP FSAGRDHMHH IWMHAGFSPG
ETTLLLMLLN ALIGLVGFAG WRSGVPEWAL ALGYVGLFAI QASITQHAWV VSKWLKRHHC
ARAQQ
|
|---|
| |