Gene Tmz1t_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3778 
Symbol 
ID7874021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp4162346 
End bp4163500 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content57% 
IMG OID643700721 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_002890745 
Protein GI237654431 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAT TGACGGTGTT CGGTACTCGC CCGGAAGCCA TAAAAATGGC TCCACTCGCC 
ATCAGCTTGG CAGAAGATCC GCGTTTTGAT GCCAAAGTTT GCGTTACTGC CCAACACCGC 
GAGATGCTGG ACCAAGTCCT GCAACTCTTT CGAATTCAAC CCGACTTCGA CCTGAACATC 
ATGAGACCCG GACAAGATCT CACCGATGTT ACTACAGCGG TTCTGCAGGG TTTGAAGGGA 
GTTCTCTCCA GCTTCAAGCC CGACATCGTT CTGGTGCATG GCGACACTAC CACGACCTTT 
TCCACCACCT TGGCCGCCTA TTATCACCAA ATCCCAGTGG CCCACGTCGA AGCGGGGCTA 
CGCACCGGCA ACCTATATTC CCCATGGCCG GAAGAGGCCA ACCGCAAGCT GACCGCCGCG 
CTTGCAGAAG TGCACTTTGC TCCAACAGAT ACTTCGCGCC AGAATTTGCT ACGCGAAGGT 
ATACCACCCG ACCACATCAT CGTCACCGGG AATACCGTTA TCGACGCCCT TCTGGATGTC 
TCCAGGCGTC TCGATACCGA TCCGGGCTTG CGCGCGGAAG CAGCGAGCCC AACGAGTTCC 
CTAACGGCGT CCGGGCGGGT CATCCTCGTT ACCGGTCATC GTCGTGAAAG CTTCGGCGGC 
GGCTTTGAGC GAATCTGCCA AGCGCTTGTC AAGATCGCCA GAGATCATCC CGATGTGAGC 
ATCATCTATC CCGTTCACCT GAACCCGAAC GTCCGCGGCC CGGTGAACCG CCTCCTGACT 
GGCATCGAGA ATATTCACCT CATCGAGCCG CTGGATTATC TGCCTTTCGT GCACCTGATG 
AAAAAGGCCT ACCTGATCCT CACCGACTCC GGAGGAATTC AAGAAGAAGC CCCATCTCTC 
GGCAAGCCGG TGCTTGTCAT GCGAGACACG ACCGAACGAC CCGAAGCAAT CACTGCCGGT 
ACCGTCAGAC TTGTCGGCAC CGACACCAAC ACCATCGTGG AAGAGATTAG AAGCCTGCTC 
GACGATAAGG CGGCATACCG CAGCATGAGC CGCGCCCACA ATCCCTACGG TGACGGAAAG 
GCCTGCCAGC GAATTCTGGA AACCTTGCTC GCTCGCTCCA CTTTTGCGCC CCTCAACGGA 
TCAGAGCCCC GCTGA
 
Protein sequence
MKVLTVFGTR PEAIKMAPLA ISLAEDPRFD AKVCVTAQHR EMLDQVLQLF RIQPDFDLNI 
MRPGQDLTDV TTAVLQGLKG VLSSFKPDIV LVHGDTTTTF STTLAAYYHQ IPVAHVEAGL 
RTGNLYSPWP EEANRKLTAA LAEVHFAPTD TSRQNLLREG IPPDHIIVTG NTVIDALLDV 
SRRLDTDPGL RAEAASPTSS LTASGRVILV TGHRRESFGG GFERICQALV KIARDHPDVS 
IIYPVHLNPN VRGPVNRLLT GIENIHLIEP LDYLPFVHLM KKAYLILTDS GGIQEEAPSL 
GKPVLVMRDT TERPEAITAG TVRLVGTDTN TIVEEIRSLL DDKAAYRSMS RAHNPYGDGK 
ACQRILETLL ARSTFAPLNG SEPR