Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3723 |
Symbol | |
ID | 7873722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 4090465 |
End bp | 4091340 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643700669 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_002890693 |
Protein GI | 237654379 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.51364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGA TACTGATCGT CGGCAGCGGC GACGTCGCCC GCCGCGCGCT GCCATGGCTG GTGCGTCGCT TTCGTGTCTT CGCGCTCGTC CGCCAGCCCG AGGCGGCCGC CGAACTGCGT GCGCTCGGCG CGGTGCCGGT CGCGGGCGAC CTCGACGACC GCCGCAGCCT GCGCCGCCTG GCCGGCATCG CCGACGCGGT GCTGCACTTC GCGCCGCCGC CGCAGACGGG CGAGGGCGAC CCGCGCATGG CGCGGCTGCT GGCCGCGCTG GCAGGTCGAT CGAGTCTACC ACAGGGGGTG GTATACATAA GCACGACAGG GGTTTACGGA GACTGCGCAG GTGTCCGGGT GGATGAGACG CGGCCGTGCC GGGCGCAGAC CGCGCGCGGC CGCCGACGGG TGGATGCCGA GCGCCGCCTG CGCGCCTTCG GCCGCCGTAA CCGGGTGCGG GTCGCCCTGC TGCGCGCGCC CGGCATCTAC GCCGCCGACC GTCTGCCGCT CGAGCGCCTG CGTCGCGCCG ATCCGGTGCT CGCCGCCGAC GAGGATGTGC ACACCAACCA CATCCACGCC GAGGACCTCG CCCGCATCGC CTGCCTGGCG CTGTTCCGTG CCGGGCCGGG GCGGGCCTAC AACGCCAGCG ACGACTCCGG CCTGCGCATG GGCGAGTACT TCGACGCGGT CGCCGAGCGT TTCGGCCTGG CGCGCCCGCC ACGCATGGCA CGCGCCGAGA TCGTCCGCCA CCTGTCGCCG CTCGCGCTGT CCTTCATGAG CGAGTCGCGC CGCCTCGACA ACCGCCGGCT GAAGCGGGAA CTGCGCCTGC ACCTGCGCTA TCCGACGGTG GCCGACGGCT TGCGCGCCGC GACCGTTCCC GTCTGA
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Protein sequence | MKRILIVGSG DVARRALPWL VRRFRVFALV RQPEAAAELR ALGAVPVAGD LDDRRSLRRL AGIADAVLHF APPPQTGEGD PRMARLLAAL AGRSSLPQGV VYISTTGVYG DCAGVRVDET RPCRAQTARG RRRVDAERRL RAFGRRNRVR VALLRAPGIY AADRLPLERL RRADPVLAAD EDVHTNHIHA EDLARIACLA LFRAGPGRAY NASDDSGLRM GEYFDAVAER FGLARPPRMA RAEIVRHLSP LALSFMSESR RLDNRRLKRE LRLHLRYPTV ADGLRAATVP V
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