| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3706 |
|---|
| Symbol | |
|---|
| ID | 7873705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 4072491 |
|---|
| End bp | 4073513 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643700652 |
|---|
| Product | formate dehydrogenase, gamma subunit |
|---|
| Protein accession | YP_002890676 |
|---|
| Protein GI | 237654362 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC ACGCGATGCG GGGGCAGCGC GGCGGCTGGC TCGCCGTGCT GCTGCTCGCG
CTCATGCTGT GGGCGACGGC GCTGCCGCTG CAGGCGGCAG CGCCGCAGCA CGGCAGTACC
GCGGCGGACC AGGCCGAGCG CCAGGTCGAG CGCCCGCTCA ACAACGCGCC GGTGTGGCGC
GCGGTGCGCT CGGGCGAGGA GCACTTCACC CTCTCGCGCA GCCCCGAGGC CGGTGTGCTG
ATCCAGAGCG AGGGCAACAC CTGGCGCCAG CTTCGCAACG GCCCGGTCAC GCTCTACGGC
GGCTGGCTGC TCATTCTCGT GCCTTCGGCC ATCCTGCTGT TCTGGCTGGT CAAGGGCACG
ATGAAGCTGC ACGGGCAGAA GACCGGGCGC AAGATGCTGC GCTTCTCGGC TTTCGAGCGC
TTCGTGCACT GGGGCACGGC GATCAGCTTC CTGCTGCTCG CCGTCACCGG AGTGGCGATC
CTGTTCGGCA AGCACGTGCT GCTGCCGCTC ATCGGCCATG GCGGGCTGGG TCTGCTGCTC
AACGCCGGCA AGCTGGTGCA CAACTACGTC GGTCCGCTGT TCGGGGTCTT CGTGGTGCTG
ATGTTCTTCG CCTTCCTGCG CGACAACGTC TGGCGGCCGA TCGACGCGCA GTGGATCCGC
CGCGCCGGCG GCCTGCTCGA CGGCAGCCAC GTGCCTTCGG GACGCTTCAA CTTCGGCGAG
AAGACCTGGT TCTGGTTCGG CGTCACCTTC CTCGGCCTCA CCGTGGCGAT CTCCGGCCTG
ATCATGGACT TCCCGAACCT GGGTGACTGG AGCCGTGCCG ACATGCAGAC CGCGAACATC
GTGCATGCGA TCGGCGCCAT CCTGATGCTG GGGCTGGCCT TCGGCCACAT CTACATGGGC
ACGCTCGGCG CCGAAGGCGC CTACGAGTCG ATGAAGACCG GCTACGTCGA CGAGACCTGG
GCGCGCGAGC ACCACGAGCA GTGGTACCAC GACGTCAAGG CGGGCAAGTC CGGGCATCCC
TGA
|
|---|
| Protein sequence | MTTHAMRGQR GGWLAVLLLA LMLWATALPL QAAAPQHGST AADQAERQVE RPLNNAPVWR
AVRSGEEHFT LSRSPEAGVL IQSEGNTWRQ LRNGPVTLYG GWLLILVPSA ILLFWLVKGT
MKLHGQKTGR KMLRFSAFER FVHWGTAISF LLLAVTGVAI LFGKHVLLPL IGHGGLGLLL
NAGKLVHNYV GPLFGVFVVL MFFAFLRDNV WRPIDAQWIR RAGGLLDGSH VPSGRFNFGE
KTWFWFGVTF LGLTVAISGL IMDFPNLGDW SRADMQTANI VHAIGAILML GLAFGHIYMG
TLGAEGAYES MKTGYVDETW AREHHEQWYH DVKAGKSGHP
|
|---|
| |