Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3702 |
Symbol | |
ID | 7873701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 4068068 |
End bp | 4068781 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643700648 |
Product | alanine racemase domain protein |
Protein accession | YP_002890672 |
Protein GI | 237654358 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACGA TCGCTGCACG CCTCGACGCG GTGCGCGCCC GCATCGCCGC CGCCGCACGA CATGCCGGGC GCGACCCTGC GGACGTGAAG CTGCTCGCGG TGAGCAAGAC CTGGCCGGCG GAGGCGGTGC GCGAGGCCGC CGCCGCCGGG CAGCGTGCCT TCGGCGAGAA CTACGTGCAG GAAGGCGTGG ACAAGGTCGA GGCGCTGCGC GCGCTCGGGC TCGAATGGCA TTTCATCGGC CCGCTGCAGA GCAACAAGAC GCGCCCGGTG GCGAACGCCT TCGACTGGGT GCATGGCATC GACCGCCTGA AGATCGCCGA GCGCCTGTCG GCGCAGCGCG ACGTGCATCT GCCGCCGCTC GACGTGTGCA TCCAGGTCAA TGTCAGCGGC GAGGACAGCA AGAGCGGCGT GGCGCCGGAC GAGGCCGGCG CGCTCGCGCA CGCGGTCGCC GCCCTGCCGC GGCTGCGCCT GCGCGGCCTC ATGTGCATCC CCGAACCGAG CGCGGACGAG GCCGTGCTGC GCGCGCGCTT CGCCGTGCTG CGCGGGCTCC ACGACGAGCT GCGCGCCGCC GGACTCGCGC TCGACACCTT GTCGATGGGC ATGTCGCACG ACCTCGAGCC GGCGATCGCC GAGGGCGCGA ACATCGTGCG CGTGGGCACG GCGATCTTCG GCGAGCGTGC CCGAACCGCG CCGACCCCGA CCCCTACGGC CTGA
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Protein sequence | MTTIAARLDA VRARIAAAAR HAGRDPADVK LLAVSKTWPA EAVREAAAAG QRAFGENYVQ EGVDKVEALR ALGLEWHFIG PLQSNKTRPV ANAFDWVHGI DRLKIAERLS AQRDVHLPPL DVCIQVNVSG EDSKSGVAPD EAGALAHAVA ALPRLRLRGL MCIPEPSADE AVLRARFAVL RGLHDELRAA GLALDTLSMG MSHDLEPAIA EGANIVRVGT AIFGERARTA PTPTPTA
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