| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3691 |
|---|
| Symbol | |
|---|
| ID | 7873690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 4051382 |
|---|
| End bp | 4053496 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643700637 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002890661 |
|---|
| Protein GI | 237654347 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.02239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGA ACCCGTTCGG CAAGAAAGCC CCGGCCCCCG GCGCCGGCAC CGAGGCCCAG
ACGATCATCG AGACCTCCGC GCCGGAGCAG ACGGTCGCCA ACAAGACTCC GTCTCCCCCC
GCGCGATCCG GCGGCCGCCT CGGCATGCTC GGCGGACTCT TCGTCGCCTG CACGGCGATC
AGCGCCGGAC TGCTCGCATA CCAGGCGCGG GATGCGAGCC TGTCCGCGCT CCAGCTCGGC
GCGGCGAGCG AACTGCAGGT GCTGCCCGGA CAGATGGCCA GGGCGGCCCG CCTCGCCCGC
CTCGGCGAGC CCGGCGCGGT CGCCGATCTC GAGCAGACCC GGGCACGCTT CGCCGGCTTG
CTGCAGACCC TCGGCCAGGG CGGCAGCCAT GCCGGCGCCA CGCTGCCGCC GCTGCCCGCG
AGCATGCGGC CCCTGCTGCA GGACCTCGAC GCCGAGTGGC AGAAAAACGC CACGCTGGCG
GCGCGCCTTG CCGCCCAAGG CGCGCCGCTC GCCGGCACCA GCGCTGCCGT GCGCGCGATC
AACGCGGCCA GCGGCGCCCT CGCCGACGCG GCCGACCAGT TCGGTCGCCG TGTGGCGGCG
ATGAACGGAG ACGCTTCTGC GCTGCGTGCG GCCCACGCCC TCCTGCTCCA TGCCCAGCGC
GCCACCCTGC AGGCAAACAC CCTTTTCTCC GCGGATGCAG ACCCGGCGGC GGCGGCCAAG
GTGCTCGCCG GCGAGGCCGA GCAGCTGCGT CAGCGCTTGG CCGAACTCGA ACGCCCGAGC
AACGGCAGCG TCCTCGACGA GAGCCTGCGC GCGCTCGGGT CCGCCGCGGC ACCGATCCTC
CAGGCGATCG AGCGCATCGG CGCCGACGCG GGCGCGCTGC AGCAGGCGAA CGCCGCGAGC
GCCGGCCTCG CGGCGAACAC CCCCGCCCTG CTCGCCGCGA GCACGGCCCT CGGCACGGCG
CTCGCCGGGC GCACCGGCGG CTTCGGTCCG CTGCATGCGG GCGCGGCGCT CGCCGCCCTG
CTCGCCGTGT TCGTGCTGGC GCAGATGGCG CGCGCCTACG CCGCCGACGC CGCGGCGCGG
CGCCTCGCCT CGGAGGCCGA GCGCCGCCAG GCCGAGGATG AGCGCAACCT CACCCAGCAG
GCCATCCTGC GCCTGATGAA CGAGATGGGC GACCTCGCCG ACGGCGACCT CACGGTGCGC
GCCACGGTCA CCGAGGACAT CACCGGCGCG ATCGCCGACT CGGTGAACTA CACCATCGAG
GAGCTCTCGG TGCTGGTACG CCGAATCAAC GACGCCGCCA CGCGGGTGAC CTCGGCCACC
GAGTCGGCGC GCCGTACCTC GACCGAGCTG CTCGCCGCCA CCGACCGCCA GTCGCAGGAG
ATCGAGGAAG CCGGCGCCAC CGCCGAGCGC ATGGCGCAGT CGATGACCGA CTCCTCCGCG
CGCGCGCTGC AGTCCGCCCA GGTGGCGCGG CGCTCGCTGG AGTCCGCGCG CAAGGGCGCG
GACGCGGTGC AGAACAGCAT CCGCGGCATG AACGACATCC GCAGCCAGAT CCAGGAGACC
GCCAAGCGCA TCAAGCGCCT CGGCGAATCC TCGCAGGAGA TCGGCGAGAT CGTCGAGCTC
ATCTCCGACA TCACCGAGCA GACCAACGTG CTCGCGCTCA ACGCCGCCAT CCAGGCCGCC
ACCGCCGGCG AGGCCGGGCG CGGCTTCACC GTCGTCGCCG AGGAAGTGCA GCGCCTCGCC
GAACGCTCGG CCGAGGCGAC CAAGCAGATC GCCGCGATCG TCAAGACCAT CCAGACCGAC
ACCCAGGACG CGGTGGGTGC GATGGAGAGC GCCACCCGCA ACGTGGTCGA GGGCGCGCAG
CTCTCCGACG CCGCCGGCCA GGCGCTCGCC GAGATCGACC AGGTCTCCAC CGAAACCGCC
AGCCTGATCG AGCGCATCTC GGCCGACGTG CAGGAACAGG CCGCGACCGC CGGCCGCGTC
GCCGCGGCGA TGAAGGACAT TCTCGCCGTC ACCGAACAGA CCTCGCTCGG CACCCGCCAG
ACCGCCGTGT CGATCGACCA GCTCGCCGAG CTGGCGGTGG AGCTGAAGGG CTCGGTCTCG
GGCTTCAAGG TCTGA
|
|---|
| Protein sequence | MALNPFGKKA PAPGAGTEAQ TIIETSAPEQ TVANKTPSPP ARSGGRLGML GGLFVACTAI
SAGLLAYQAR DASLSALQLG AASELQVLPG QMARAARLAR LGEPGAVADL EQTRARFAGL
LQTLGQGGSH AGATLPPLPA SMRPLLQDLD AEWQKNATLA ARLAAQGAPL AGTSAAVRAI
NAASGALADA ADQFGRRVAA MNGDASALRA AHALLLHAQR ATLQANTLFS ADADPAAAAK
VLAGEAEQLR QRLAELERPS NGSVLDESLR ALGSAAAPIL QAIERIGADA GALQQANAAS
AGLAANTPAL LAASTALGTA LAGRTGGFGP LHAGAALAAL LAVFVLAQMA RAYAADAAAR
RLASEAERRQ AEDERNLTQQ AILRLMNEMG DLADGDLTVR ATVTEDITGA IADSVNYTIE
ELSVLVRRIN DAATRVTSAT ESARRTSTEL LAATDRQSQE IEEAGATAER MAQSMTDSSA
RALQSAQVAR RSLESARKGA DAVQNSIRGM NDIRSQIQET AKRIKRLGES SQEIGEIVEL
ISDITEQTNV LALNAAIQAA TAGEAGRGFT VVAEEVQRLA ERSAEATKQI AAIVKTIQTD
TQDAVGAMES ATRNVVEGAQ LSDAAGQALA EIDQVSTETA SLIERISADV QEQAATAGRV
AAAMKDILAV TEQTSLGTRQ TAVSIDQLAE LAVELKGSVS GFKV
|
|---|
| |