| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3592 |
|---|
| Symbol | |
|---|
| ID | 7873097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3938806 |
|---|
| End bp | 3941010 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643700532 |
|---|
| Product | protein of unknown function DUF181 |
|---|
| Protein accession | YP_002890562 |
|---|
| Protein GI | 237654248 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1944] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03549] conserved hypothetical protein TIGR03549 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0680194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA AGGTCAACTT CCTCGACAAG CTTCGCCTCG AAGCCAGGTT CGACGACTTC
ACGGTGATCG CCGATCAGCC GATCCGTTAC AAGGGCGACG GCTCGGCGCC GGGGCCGTTC
GACTATTTCC TGGCCTCGTC GGCCTTGTGC GCGGCCTACT TCGTGAAGCT GTACTGCGAC
ACCCGCAACC TCCCCACCGA CAACATCCGC CTGTCGCAGA ACAACATCGT CGACCCCGAG
AACCGCTACA AGCAGATCTT CAAGATCCAG GTCGAGCTGC CGGAGGACCT CTCCGCCAAG
GACCGCCAGG GCATCCTGCG CTCGATCGAG CGCTGCACCG TGAAGAAGGT GGTGCAGACC
GGGCCGGAGT TCGTCATCGA GGAGGTGGAG AACCTGGACG CCGATGCGCA GGCCCTGCTG
ACGCTGAATC CGGATCCGGA CGCCCACACC TACATCCTCG GCAAGGATCT GCCGCTGGAG
CAGACGATCG CCAACATGTC GAAGCTGCTG GCGGACCTCG GCATCAAGAT CGAGATCGCG
TCGTGGCGCA ACCTCGTGCC CAACGTGTGG TCGCTGCACA TCCGCGATGC GCATTCGCCG
ATGTGCTTCA CCAACGGCAA GGGGGCGAGC AAGGAGAGCG CCTTGGCGTC GGCGCTGGGC
GAATACATCG AGCGCCTCAA CTGCAACCAC TTCTACAACG ACCAGTTCTG GGGCGAGGAC
ATCGCCGACG CGGCGTTCGT GCATTACCCC AACGAGCGCT GGTTCAAGCC CGGCCGCAAG
GATGCGCTGC CGGCCGGGCT GCTCGACGAG TATTGCCTGG AGATCTACGA CCCCGAGGGC
GAGCTGCGCG CCTCGCATCT GTACGACACC AACTCCGGCA ACGTGGCGCG CGGCATCTGC
GCGCTGCCCT ACGTGCGCCA GTCGGACGGC GAGGTGGTGT ATTTCCCCAC CAACCTGATC
GACAACCTCT ACCTCAGCAA CGGCATGAGC GCCGGCAACA CGCTGCCCGA GGCGCAGGTG
CAGTGCCTGT CGGAGATCTT CGAGCGCGCG GTCAAGCGCG AGATCATCGA AGGCGAGATG
GCGCTGCCCG ACGTGCCGCC GCAGGTGCTG GCGAAGTATC CCGGCATCGT GGCCGGCATC
CAGGGGCTGG AGGCGCAGGG CTTTCCGGTG CTGGTGAAGG ATGCGTCGCT GGGCGGCAAG
TATCCGGTGA TGTGCGTGAC CCTGATGAAC CCGCGCACGG GCGGCGTGTT CGCCTCGTTC
GGGGCGCACC CGAGCCTGGA GGTGGCGCTG GAGCGCAGCC TGACCGAGCT GCTGCAGGGG
CGCAGCTTCG AGGGCCTCAA CGACCTGCCC GCGCCCACCT TCGAGAGCAA CGCGGTCACC
GAGCCGAATA ATTTCGTCGA GCACTTCATC GATTCGAGCG GCGTGGTGTC GTGGCGCTTC
TTCAGCGCCA AGGCCGATTA CCCGTTCGTC GAATGGGATT TCTCTTCCCA CGGTGAAAGG
TCCAACGCCG AGGAAGCCGC GACCCTGTTC GGCATCCTCG AGGACATGGG CAAGGAAGTG
TACATGGCGG TGTTCGACCA GCTCGGCGCC ACCGTCTGCC GCATCGTCGT GCCGGGGTAT
TCCGAGGTCT ATCCGGTGGA TGACCTGATC TGGAACAACA CCAACAAGGC GCTGGCCTTC
CGCGCCGACA TCCTCAACCT GCATCGCCTC GACGATGAGG CCCTCGAAGC CCTGCTCGAG
CGCCTGGAAG AAAGCGAGCT CGACGATTAC ACCGACATCA TCGAGCTGAT CGGCATCGAG
TTCGACGAAA ACACGGTGTG GGGTCAGCTC ACGATCCTGG AGCTGAAGCT GCTGATCCAT
CTCGCCCTGC AGCAATTGGA AGAGGCGAAG GAGCGCGTCG AGGCCTTCCT GCAATACAAC
GACAACACGG TCGATCGCGT GCTGTTCTAC CAGGCCCTGA ACGTGGTGCT GGAGGTGATG
CTGGACGACG AGCTGGCGCT GGAAGACTAC GAGGCCAACT TCCGCCGCAT GTTCGGCGAC
GCGCGCATGG ACGCGGTGAT CGGCTCGGTG GAGGGCCGCG TGCGCTTCCA TGGCCTGACG
CCGACGAGCA TGAAGCTCGA AGGGCTCGAC CGCCACCAGC GCCTGATCGA CAGCTACCGC
AAGCTGCACC GGGCGCGGGC ACGCGCGGCC GGCGTGTCCG CGTAG
|
|---|
| Protein sequence | MEIKVNFLDK LRLEARFDDF TVIADQPIRY KGDGSAPGPF DYFLASSALC AAYFVKLYCD
TRNLPTDNIR LSQNNIVDPE NRYKQIFKIQ VELPEDLSAK DRQGILRSIE RCTVKKVVQT
GPEFVIEEVE NLDADAQALL TLNPDPDAHT YILGKDLPLE QTIANMSKLL ADLGIKIEIA
SWRNLVPNVW SLHIRDAHSP MCFTNGKGAS KESALASALG EYIERLNCNH FYNDQFWGED
IADAAFVHYP NERWFKPGRK DALPAGLLDE YCLEIYDPEG ELRASHLYDT NSGNVARGIC
ALPYVRQSDG EVVYFPTNLI DNLYLSNGMS AGNTLPEAQV QCLSEIFERA VKREIIEGEM
ALPDVPPQVL AKYPGIVAGI QGLEAQGFPV LVKDASLGGK YPVMCVTLMN PRTGGVFASF
GAHPSLEVAL ERSLTELLQG RSFEGLNDLP APTFESNAVT EPNNFVEHFI DSSGVVSWRF
FSAKADYPFV EWDFSSHGER SNAEEAATLF GILEDMGKEV YMAVFDQLGA TVCRIVVPGY
SEVYPVDDLI WNNTNKALAF RADILNLHRL DDEALEALLE RLEESELDDY TDIIELIGIE
FDENTVWGQL TILELKLLIH LALQQLEEAK ERVEAFLQYN DNTVDRVLFY QALNVVLEVM
LDDELALEDY EANFRRMFGD ARMDAVIGSV EGRVRFHGLT PTSMKLEGLD RHQRLIDSYR
KLHRARARAA GVSA
|
|---|
| |