Gene Tmz1t_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3554 
Symbol 
ID7873060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp3894655 
End bp3895338 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content74% 
IMG OID643700495 
Productglycosyl transferase family 2 
Protein accessionYP_002890525 
Protein GI237654211 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.413559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGGGC GCCCGGTTTC GCTCTCCATC GTCGTGCCGA TGGTGGACGA GGCGGCCACG 
CTGCCCGAAC TGCTCACCCA TCTCGCCGCT TGGCGCGACC GCGGCTGCGA GATCGTGCTG 
GTGGACGGCG GCAGCCGCGA CGACTCGGTG GCGATCGCGC GCGCAGCCGG CTTCCGCGTG 
ATGGTCGCCG AGCGTGGCCG CGCCAGGCAG ATGAACGCGG GTGCGGCGGC GTGCGGCGGA 
GACATCCTGT TGTTCCTGCA TGCGGACACG CGCCTGCCGG AAGATGCGGA CGCGACGCTG 
CGGGCCGTGC AGGCCGGCCG TGCCTGGGGC CGTTTCGACG TGCGCATCGA CGGGCGCCCG 
CGCATGCTGC GCGTGGTGGC AGCGTTGATG AACCTGCGCT CGCGCTCGAG CGGGATCGCC 
ACCGGCGACC AGGCCATCTT CGTGCGCCGG GAGGTGTTCG AGGCGGTGGG CGGTTTCCCG 
GACCAGCCGC TGATGGAGGA CATCGAGCTC TCGCGCCGGC TGCTGCGCGT GTCGCGCCCG 
GCCTGCCTGC GGGCGCGGGT GCGGACCTCG GGGCGACGCT GGGAGCAGCG CGGGGTGTGG 
CGCACCATCG TACTGATGTG GCGCCTGCGC TGGGCCTACT GGCGCGGCGT GCCGGCCGAG 
CGCCTCGCCG AGGCCTACCG GTGA
 
Protein sequence
MEGRPVSLSI VVPMVDEAAT LPELLTHLAA WRDRGCEIVL VDGGSRDDSV AIARAAGFRV 
MVAERGRARQ MNAGAAACGG DILLFLHADT RLPEDADATL RAVQAGRAWG RFDVRIDGRP 
RMLRVVAALM NLRSRSSGIA TGDQAIFVRR EVFEAVGGFP DQPLMEDIEL SRRLLRVSRP 
ACLRARVRTS GRRWEQRGVW RTIVLMWRLR WAYWRGVPAE RLAEAYR