Gene Tmz1t_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3501 
Symbol 
ID7873007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp3838501 
End bp3839124 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID643700441 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002890472 
Protein GI237654158 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.648819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGA CGATGTGGCT TGGCTTTCTT GCCGCCGCAC TGGTGATCGC GGTCTCGCCG 
GGACCGGGCG CCGTGCTGTC GATGTCGACC GGCCTGCGCT ACGGCTACAC CGCCGCGCTG 
CGCGCGATCA CCGGCCTGGA GATCGCGCTG TTGCTGCAAC TCGGCGTCGT GGCGCTCGGC 
CTCGGTGCGG TGCTCGCGAC CTCGGAGACG GCGTTCGCGG TGGTGAAATT CGCCGGCGCG 
GCCTACCTGA TCTGGCTCGG CGTGCAGAAG TGGCGCTCGC CGCCCGAGCC GATCGACGGG 
GACGGCGAGG GCGTGCGGGT GCAGTCGCGC CGCCAGCTCT ACGCTCAGGG CATCCTGGTG 
AACCTGACCA ACCCGAAGGC GATCGTGTTC ATCGCCGCGC TGGTGCCGCA GTTCATCGTG 
CCCGACCGGC CGCAGTGGCC GCAGTTCGCG ATCATCGGCG CAACCATGGT CGGGGTCGAC 
GTGATGGTGA TGTCCTGCTA TGCGCTGCTC GCCACGCGTT TCCGCCCCCT GCTGCGCGAC 
CCGCGCCTGC TGCGCCTGCA GAACCGCCTG TTCGGCGGCC TCTTCGTCGG CGCCGGGGCG 
ATGCTGGCGG CCTCGAGCCG CTGA
 
Protein sequence
MSWTMWLGFL AAALVIAVSP GPGAVLSMST GLRYGYTAAL RAITGLEIAL LLQLGVVALG 
LGAVLATSET AFAVVKFAGA AYLIWLGVQK WRSPPEPIDG DGEGVRVQSR RQLYAQGILV 
NLTNPKAIVF IAALVPQFIV PDRPQWPQFA IIGATMVGVD VMVMSCYALL ATRFRPLLRD 
PRLLRLQNRL FGGLFVGAGA MLAASSR