Gene Tmz1t_3487 details

Gene Information

• Locus tag: Tmz1t_3487
• ID: 7872993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 3825496
• End bp: 3826167
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643700427
• Product: transcriptional regulator, GntR family
• Protein accession: YP_002890458
• Protein GI: 237654144
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCCA CCCGCATCGC TCCGATCGCG CTCTACCAGG AAGTGGCCGA GCGCCTGCGC 
CAGCGGATCT TCTCGCACGA GCTGCCGCCC GGCACCTGGG TGGACGAACA GGCGCTGGCC 
GAGCACTACG GCATCTCGCG CACACCGCTG CGCGAGGCGC TGAAGGTACT GGCCTCCGAG 
GGCCTGGTGA CGCTCAAGCC GCGGCGCGGC TGCTACGTGA CCGAGATCTC GGAGCGCGAT 
CTCGACGAGG TGTTCAGCGT GATGTCGATG CTCGAAGGCG AGTGCGCCCG GCTGTCGGCT 
GCGCGCGCGA CCGAGGACGA CCTCGCCCGC CTGCGCGCGA TCCACGCCAA CCTCGAGAAG 
GCCGCCGGCA AGCCCGACAT CGACCGCTTC TTCGAGGCCA ACCAGGCCTT CCACCTCGCC 
CTGCAGGAGA TCGCCGACAA TCGCTGGTTG CTCCACGTGA TCGAGGACCT GCGCAAGGTG 
ATCAAGCTGT CGCGCCACCA CTCGCTGTTC TCGGAGGGCC GGCTGGAGCA GTCGCTCGCC 
GAGCACCGCG ACATCCTCCA GGCCTTGCTC GACCGCGACG GCGCGCGCGC CGAGACCCTG 
ATGCGCACCC ACATCCTCAG CGGCCGCGCC GCCCTCGCCC GCATCGCCGA GGCGAAGACG 
CAGGCCGCGT GA 

 

Protein sequence

MNATRIAPIA LYQEVAERLR QRIFSHELPP GTWVDEQALA EHYGISRTPL REALKVLASE 
GLVTLKPRRG CYVTEISERD LDEVFSVMSM LEGECARLSA ARATEDDLAR LRAIHANLEK 
AAGKPDIDRF FEANQAFHLA LQEIADNRWL LHVIEDLRKV IKLSRHHSLF SEGRLEQSLA 
EHRDILQALL DRDGARAETL MRTHILSGRA ALARIAEAKT QAA