| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3486 |
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| Symbol | |
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| ID | 7872992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3822920 |
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| End bp | 3825085 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643700426 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_002890457 |
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| Protein GI | 237654143 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAAG CCAACGATCC CGTCTATCCC CAGCCCGACA TCGAGGCCTG GAAAAAGGCT
GCCGCCAAGC AGGCGCCGGG GGGCGACCTC GACAAGCTGA ACTGGATCAC GCCCGAGGGC
CTCTCGGTCA AGCCGCTGTA CACCAAGGCC GACACCGAAG GCCTGCAGCA CGCCGACACG
CTGCCCGGCT TCGAGCCCTT CCTGCGCGGC CCGCAGCCCA CCATGTACGC GGTCAAGCCG
TGGACCATCC GCCAGTACGC CGGCTTCTCC ACCGCCGAAG CGTCCAACGC CTTCTACCGC
AAGGCGCTCG CCGCCGGCGG CCAGGGCGTG TCGGTCGCGT TCGACCTGGC GACCCACCGC
GGCTACGACT CCGACCATCC GCGCGTGACC GGCGACGTCG GCAAGGCCGG CGTGGCGATC
GACTCGGTCG AGGACATGAA GATCCTGTTC GACCAGATCC CGCTCGACAA GGTGTCGGTG
TCGATGACCA TGAACGGTGC CGTGCTGCCG ATCCTCGCCG GCTACATCGT CGCCGCCGAG
GAGCAGGGCG TGAGCCAGGA CAAGCTCTCG GGCACGATCC AGAACGACAT CCTGAAAGAG
TTCATGGTGC GGAACACCTA CATCTATCCG CCCACCCCGT CGATGAAGAT CATCGCCGAC
ATCTTCGGCT ACACCGCGCA GCACATGCCG AAGTTCAACA GCATCTCGAT TTCCGGTTAC
CACATCCAGG AGGCGGGCGC CAACCAGGCC ATCGAGCTCG CCTTCACGCT CGCCGACGGT
GTCGAGTACG TGCGCACCGG CATCAACTCC GGCATGGACG TCGACACCTT CGCCGGCCGC
CTGTCCTTCT TCTGGGCGGT GGGCATGAAC TTCTACCTCG AGATCGCCAA GATGCGCGCC
GCGCGCCTGC TGTGGTGGCG GCTCATGAAG CAGTTCAACC CCAAGAGCGC CAAGTCGATG
ATGCTGCGCA CGCACTCGCA GACCTCCGGC TGGTCGCTCA CCGAGCAGGA CCCCTACAAC
AACGTCGTGC GCACCACGAT CGAGGCCATG GCTGCGGTGT TCGGCGGCAC CCAGTCGCTG
CACACCAACG CGCTCGACGA GGCGATCGCC CTGCCTACCG AGTTCTCCGC CCGCATCGCG
CGCAACACCC AGATCATCAT CCAGGAAGAG ACCCACATCT GTAACGTGGT CGACCCCTGG
GCCGGCTCCT ACATGATGGA GAAGCTCACC CAGGACATGG CCGACAAGGC CTGGGCGCTG
ATCGAGGAGA TCGAGTCCAT GGGCGGCATG ACCCGCGCGG TCGAATCCGG CTGGGCCAAG
ATGAAGGTCG AGGAGTGCGC CGCCGACAAG CAGGCGCGCA TCGACTCGGG CAAGGACGTG
ATCGTCGGCG TGAACAAGTA CAAGCTCGCC AAGGAAGACC CGATCGACAT CCTCGACATC
GACAACCATG CGGTGCGCGA GGCGCAGATC GCCCGCCTCG ACAAGATCCG CGCCACCCGC
GACACCGCCG CGGTGCAGGC CGCGCTCGCT GCGCTCACCA AGTGCGCCGA GACGGGCGAA
GGCAACCTGC TCGACCTGTC GGTCAAGGCC ATTCGCCTGC GTGCCACCGT CGGCGAGATC
TCCGACGCGC TCGAGAAGGT CTTCGGCCGT TACCGTGCCA ATCCGCAAGC CGTTTCCGGC
GTCTATGGAG CCGTCGTGGA AGAACAGGAA GACTGGAAGA CCCTCAAGGC CGACATCGAG
GCCTTCATCG CCGAAGAAGG CCGCCGCCCG CGCGTGATGA TCGCCAAGCT CGGCCAGGAC
GGCCACGACC GCGGCGCCAA GGTGGTGGCC TCGGCCTTCG CCGACCTCGG TTTCGACATC
GACATCGGCC CGCTCTTCCA GACCCCGGAA GAAGCCGCCC GCCACGCGGT CGAGAACGAC
GTCCATGCGG TCGGCTGCTC CAGCCTCGCC GCCGGCCACA AGACCCTGGT CCCGGCCGTC
ATCGACGAGT TGAAGCGCCT CGGCGCCGAC GACATCATCA CTTTCGTCGG TGGCGTGATC
CCGGCGCAGG ACTACGACAC GCTGTACGCC GCCGGCGCCA AGGGCATCTT CGGCCCCGGC
ACGCCGATCC CGGCGGCCGC ACGCGAGGTG CTCAAGCAGA TCCGCGCCGC ACGCAAGGCG
GGGTGA
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| Protein sequence | MSKANDPVYP QPDIEAWKKA AAKQAPGGDL DKLNWITPEG LSVKPLYTKA DTEGLQHADT
LPGFEPFLRG PQPTMYAVKP WTIRQYAGFS TAEASNAFYR KALAAGGQGV SVAFDLATHR
GYDSDHPRVT GDVGKAGVAI DSVEDMKILF DQIPLDKVSV SMTMNGAVLP ILAGYIVAAE
EQGVSQDKLS GTIQNDILKE FMVRNTYIYP PTPSMKIIAD IFGYTAQHMP KFNSISISGY
HIQEAGANQA IELAFTLADG VEYVRTGINS GMDVDTFAGR LSFFWAVGMN FYLEIAKMRA
ARLLWWRLMK QFNPKSAKSM MLRTHSQTSG WSLTEQDPYN NVVRTTIEAM AAVFGGTQSL
HTNALDEAIA LPTEFSARIA RNTQIIIQEE THICNVVDPW AGSYMMEKLT QDMADKAWAL
IEEIESMGGM TRAVESGWAK MKVEECAADK QARIDSGKDV IVGVNKYKLA KEDPIDILDI
DNHAVREAQI ARLDKIRATR DTAAVQAALA ALTKCAETGE GNLLDLSVKA IRLRATVGEI
SDALEKVFGR YRANPQAVSG VYGAVVEEQE DWKTLKADIE AFIAEEGRRP RVMIAKLGQD
GHDRGAKVVA SAFADLGFDI DIGPLFQTPE EAARHAVEND VHAVGCSSLA AGHKTLVPAV
IDELKRLGAD DIITFVGGVI PAQDYDTLYA AGAKGIFGPG TPIPAAAREV LKQIRAARKA
G
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