| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3466 |
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| Symbol | |
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| ID | 7872972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3793278 |
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| End bp | 3795311 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643700406 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002890437 |
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| Protein GI | 237654123 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.297654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCACGA CGCAGACGCC CGATGGGCAG ATGTTTTCCG ATCCCGGCAA CGATGCTGTG
GTCATGGCTG CATGGGAGCG CTTCCTCGAT GGCGGAGGAG GGCCGTCCGA TGCGCTGCGC
GGCCTGATCG ACGGTTCATG GCAGCGCTGT CAGCAGCACA ACGTCGACCC CGACAAGCGC
AGCGCACCGC CGCCGGTGGC CGAGGCCACG CTGGCGTCGA TGAAGCTGCG CCATAGCGAG
CTGCTGCAGG CGAGCGCGCC CGTCATGGCC TGTGCGCGTG ATTTCCTCGC CGAAACCGGC
ACCGTGATGG CGCTCGCCGA TACCAGCTCG ACCATCCTGA CGATGGAAGG CGACAACCCC
ACGCTGGGTT CGGCCGAGTC CATCCACCTG CTGCCCGGCG TGTCCTGGAG CGAGCGCATC
TGCGGCACCA ATGCCATCGG CACCGCGCTC GCGGTGGGCC AGCCGGTGCA GATCCATTCC
GCCGAGCACT ACTGTGCCGG CATCAAGCGC TGGACCTGCT CGGCGACCGT GATCCGCCAT
CCGCAGGACG GCGAGATCCT CGGCGTGGTG GATGTGTCCG GCCTGTCGGA AACCTACAGC
CGCCACAGCC TGGCACTGGT CGTCACCACG GCGAGTCGCA TCGAGAGCCG GCTGACCATG
CTCGAGATGG AGCGCCGCTA CCGCCTGCTC GAGGCGGCCC TGCCTTACTG GGCCGGAGGC
ACCGACGGCA TCGTGCTGTT CGACCGTCGC GGCTATCCCT TCAAGGCCAA CGAGAACGCG
CAGGCTGCCA TTGCTGCCTT CGGCGCCGAT CTCGATCTTG CCGCGCCAAG GCGCATCCCG
GCGCTCGCCC TCGATGGCGA GAGCCAGCCG CTGCCGGCGT GGCTGCGCGT CGAATGGCTG
GTGCCGGTGA GCGAACGCGG CGAGCGCCTG GGTACGCTGC TGATCGTGCC CTTGCCGCGG
GTCGGCCGTG CGCGGGCGGG CGATCCGGTG CGCGACCTGG CCGCCGCGCC GGCCGTCGCG
CGCGACCTGC GCTCGGCGCA GGTGCCTGCC GGCTTCGCCT CCATCGTCAC CGCTGACGTC
GGCTTGTGCG ACGCGCTGCG CAAGGCCGAC CAGCTCGCGC GCTCGCGCGT GCCGGTGCTG
CTGCTGGGCG AAACCGGTGT CGGCAAGGAG GAGTTCGCGC AGGGCATCCA CAGGGCCAGC
CCTTTCCGCG ACGGCCCCTA CGTGGCGCTC AACTGCGGCG GGCTTTCGCG CGAGCTGCTG
GCGAGCGAGC TGTTCGGCTA CGTCGAGGGC GCGTTCACCG GCGCACGCAA GGGCGGGCTG
ATGGGCAAGA TCGAGGCGGC CAATGGCGGC ACGCTGTTCC TCGACGAGAT CGGCGAGATG
CCGCTCGACC TGCAGCCACA CCTGCTGCGC GTGCTGGAGC AGGGCGAGAT TTACCGCCTG
GGCGAGAACA CGCCGCGCAA GGTCAATTTC CGCCTGATCG CGGCCACCCA CCGCGACCTG
CGACAGGAGG TGGCGGCCGG CCGCTTCCGC ATGGATTTCT ACTACCGCGT CGCGGTGACC
TCGATCCGCA TCCCGTCGCT GCGCGAGCGC CGCGGCGACG TGCGCCTGCT CGCTGCGCAC
TTCGTCGAGT TGTTCCGCGA GCGCCATCGG CTTGGCCCCC GCCGGCTCGA CGATGCACTG
CTGGCGACCC TGGACGCCTA CGCCTGGCCG GGCAACGTGC GCGAGCTACG CAACGTGATC
GAGAGCATGG TGCTGATGGG TGAGGGGGAA TGTCTGGGCC TCGAGGCCCT GCCGCCGGAG
CTGGCGATGG AGCAGGGCGT GCCGGCGTCA GGCCCGGCGC CGGCTGGCGG CGCCACGCCT
GCCGTACGCA GCATCGCCAC CGGCGAGGCG GAACTGATCC GCTGCGCCAT CGCTGCCACC
CGGGGCAACC TGACACAGGC AGCGCGCGAG CTCGACATCG CCAAGAGCAC GCTGTACCAG
AAGGTGAAGC AGTACGGCCT GGAGTCCGAC ATCAGCCGGG TCCGGGGCAG CTAG
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| Protein sequence | MSTTQTPDGQ MFSDPGNDAV VMAAWERFLD GGGGPSDALR GLIDGSWQRC QQHNVDPDKR
SAPPPVAEAT LASMKLRHSE LLQASAPVMA CARDFLAETG TVMALADTSS TILTMEGDNP
TLGSAESIHL LPGVSWSERI CGTNAIGTAL AVGQPVQIHS AEHYCAGIKR WTCSATVIRH
PQDGEILGVV DVSGLSETYS RHSLALVVTT ASRIESRLTM LEMERRYRLL EAALPYWAGG
TDGIVLFDRR GYPFKANENA QAAIAAFGAD LDLAAPRRIP ALALDGESQP LPAWLRVEWL
VPVSERGERL GTLLIVPLPR VGRARAGDPV RDLAAAPAVA RDLRSAQVPA GFASIVTADV
GLCDALRKAD QLARSRVPVL LLGETGVGKE EFAQGIHRAS PFRDGPYVAL NCGGLSRELL
ASELFGYVEG AFTGARKGGL MGKIEAANGG TLFLDEIGEM PLDLQPHLLR VLEQGEIYRL
GENTPRKVNF RLIAATHRDL RQEVAAGRFR MDFYYRVAVT SIRIPSLRER RGDVRLLAAH
FVELFRERHR LGPRRLDDAL LATLDAYAWP GNVRELRNVI ESMVLMGEGE CLGLEALPPE
LAMEQGVPAS GPAPAGGATP AVRSIATGEA ELIRCAIAAT RGNLTQAARE LDIAKSTLYQ
KVKQYGLESD ISRVRGS
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