Gene Tmz1t_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3460 
Symbol 
ID7872966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3782412 
End bp3785633 
Gene Length3222 bp 
Protein Length1073 aa 
Translation table11 
GC content70% 
IMG OID643700400 
Productacriflavin resistance protein 
Protein accessionYP_002890431 
Protein GI237654117 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGA AGGGCGAGGG GCCGATCGGC AGCGGGCGCT TCAACCTGTC CGAATGGGGG 
CTGACCCACC GCTCCCTGGT GCTGTACTTC CTGATCGTGT GCACGCTGAG CGGGATGTTC
GCCTACACCC GGCTCGGCCA GTCCGAGGAT CCGCCCTTCA CCTTCAAGGT CATGGTGGTG
CGCGCCGAGT GGCCGGGGGC GAGTGCGCGC GAGGTCGAAC GGCAGGTCAC CGACAAGATC
GAGAAGAAGC TGCAGGAGAT CGCCCAGGCC GACATCATCC GCAGCTACTC CAAGCCGGGC
GAGGCGATGG TCTTCTTCGT GGCGAAGGAC TCCACGCGCG CGCGCGACAT CCCCGACATC
TGGTACCAGG CGCGCAAGAA GATCGGCGAC ATCGCCCACA CCTTCCCGAC CGGCGTGCGC
GGACCGTATT TCAACGACGA GTTCGGCGAC ACTTACGGGA ATGTCTTCGC CCTGCTCGGC
GAGGGCGTGA GCCACGCCGA GCTCGAGCGC CACGCCGAGG CGATCCGCGG CGAGCTGCTG
CGCGTGAAGG ACGTCGCCAA GGTGAGCTTC TTCGCCGAGC AGCCGCAGCG CGTCTTCGTG
GAGATCTCCA ACACGCGCCT CGCCACCCTG GGCGTGCGCC TGGACGACAT CGTCGGCGCG
CTCGCCCGGC AGAACGCGGA GACCGGCGCC GGCTTCTTCG AGACCGGGGA TGAGCGCATC
TGGCTGCGGC CGTCGGGGCA GTTCGAGGAC CTAGACGCGA TTCGCGCCAC CGTGATCCGC
GCCGGCGGGC GCAGCCTGCG CCTGGGCGAC ATCGCCGAGG TGCGCCGCGG CTACGCCGAC
CCGCCGGCCG AGCGCCTGCG CTTCATGGGG CAGGAGGCGC TCGGCATCGG TGTGTCGATG
CGCAGCGGCG GCGACATCGT CGCGCTTGGC CGCCAGCTCG ACGCGGCGGT GGAGAAGATC
GTCGCGCAGT TGCCCGTCGG CATCCGCCTC GAGCGCGTGG CCGACCAGCC GCGTGCGGTC
ACGCGGGCGG TCGACGAGTT CGTCAAGGTG CTCGCCGAGG CGGTGCTCAT CGTGATGGCG
GTGAGCCTGC TGTCGCTCGG CTTCCGCACC GGCGTGGTGG TGCTGGTGAT CATCCCGGTG
GTGCTGGCGA TCACCTTCAT GTTCATGCAC CTGTTCGACA TCGGCCTGCA CAAGATCTCG
CTCGGGGCGT TGATCATCGC GCTCGGCTTG TTGGTGGACG ACGCGATCAT CGCCGTCGAG
ATGATGGCGA GCAAGATGGA GCAGGGCTGG GGCCGGGTGC GGGCGGCGAG CTACGCGTGG
ACCTCGACCG CGATGCCGAT GCTCTCGGGC ACGCTGGTGA CGGCAGCGGG TTTCCTGCCG
GTGGCGCTGG CGGCGTCCTC GGTGGGCGAG TTCACGCGCT CGATCTTCCA GGTCACGGTG
ACCGCGCTGC TGGTGTCGTG GATCGCCGCG GTGCTCTTCG TGCCCTATCT GGGCTACTAC
CTGCTGCCCG ACTTCAGCAA GCGCGCCGGG CAGCCCTCGC GGCTGGCGCG CGTGGTCGGA
AGGGTCTGGC CGGCGCTGGG GCGGCGGATG GCGGAGCGCG ACCTCCATGC CCACGAGCAG
CACGACGAGT TCGCGATCTA CCACACGCCC TTCTACAACC GGCTGCGGGC GCTGGTGAAC
GCCTGCGTGC GCTGGCGCTG GGGGGTGATC CTGCTCACCG TGGCGATCTT CGTCGGCGCG
CTGTTCGTGT TCGCCCGCTT CGTGCCGCAG CAGTTCTTCC CCGACTCGAC GCGGCCCGAG
CTGCTGGTCG ACCTGCGCCT GGCCGAGGGT GCGTCGCACC ACGCCACCGA GGTCGCGGTG
AAGCGGCTGG AGGCCTTCCT CGACAGGCAG GAGGGCATCG AGAACTACGT GGCCTGGGTG
GGCACCGGCA GCCCGCGCTT CTACCTGCCG CTCGACCAGC AACTCGCGCA GACCAACTTC
GCCCAGCTCG TGATCCTCAC CGCCGGCCTG GCCGAGCGCG AGGCGCTGCG CGCGAAACTG
ATCCACCTCT TCGAGGACGA GCCCTGGCCG CTGCGCGGCA TCGTCGTCCG GCTGGAGAAC
GGGCCGCCGG TGGGCTTTCC GGTGCAGTAC CGGGTGAGCG GGCCGGATCT GGCCGAGCTG
CACCGGCGTG CGCAGGCGGT GGCCGAGGCG ATGCGCGCCA ATCCGCACCT TTCCAATGTG
CATATGGACT GGGTGGAGCC GTCCAAGGTG GTGCGGGTGG CGATCGACCA GGACAAGGCG
CGCCTGCTCG GCGTCTCCAC CCAGGACCTC TCCAGTCTGC TCGCCACCTC GCTGCAGGGC
ATGACCGCAA CCCAGTTCCG CGAGGGCAAC AAGACCATCG CGCTGGTGCT GCGCGGTGCG
GAGAGCGAGC GCGCGCACCT GTCGCAGCTG CCCGACCTCG CCCTGCCGGT GGGCGGCGGG
CGCAGCGTGC CCTTGGCGCA GGTGGCGCGC CTCGAGCACG ACTTCGAGCC GGGGGTGATC
TGGCGGCGCA ACCGCATCCC CACCGTGACC GTGCGCGCCT CGCTCTACGA CGGCACCCAG
CCCGCGGTGG TGGTGGGCCA GCTCGCGCCG CGCATGGCCG AGCTCTCCGC GCAGCTGCCG
CTCGGCTACC GCCTCGAGGT CGGCGGCGCG GTCGAGGAGA GCGCCAAGGG CAGCGGCTCG
GTGGGCGCCG GCATGCCGAT CTTCGTGCTC ACCGTGCTCA CGGTGCTGAT GCTGCAGCTG
AAGAGCTTCT CGCGCACCAT CATCGTCGTG CTCACCGCAC CGCTCGGCCT GATCGGTGTC
GCCGCCTTCC TGCTCGCCTT CGGCAAGCCC TTCGGCTTCG TCGCCCTGCT CGGCACGATC
GCGCTGTCGG GCATGATCAT GCGCAACTCG GTGATCCTGG TGGACCAGAT CCGCCAGGAC
GTCGAGGCCG GGCGCATGCA GTGGGAGGCC ATCGTCGAGT CCGCGGTGCG GCGCTTCCGC
CCGATCATGC TCACCGCCGC GGCGGCCATC CTGGCCATGG TGCCCTTGTC GCGCAGCACC
TTCTTCGGGC CGATGGCGGT GGCGATCATG GGCGGGCTGA CCGTCGCCAC GGTGCTCACC
ATCCTCTTCC TGCCCGCGCT CTACGCCGCC TGGTACCGTG TCAAGCCGGC GGACGAGGAG
CGCGCGGCGG CGGATCGCAG CGCAGCAACT GCGCTAGAAT GA
 
Protein sequence
MSMKGEGPIG SGRFNLSEWG LTHRSLVLYF LIVCTLSGMF AYTRLGQSED PPFTFKVMVV 
RAEWPGASAR EVERQVTDKI EKKLQEIAQA DIIRSYSKPG EAMVFFVAKD STRARDIPDI
WYQARKKIGD IAHTFPTGVR GPYFNDEFGD TYGNVFALLG EGVSHAELER HAEAIRGELL
RVKDVAKVSF FAEQPQRVFV EISNTRLATL GVRLDDIVGA LARQNAETGA GFFETGDERI
WLRPSGQFED LDAIRATVIR AGGRSLRLGD IAEVRRGYAD PPAERLRFMG QEALGIGVSM
RSGGDIVALG RQLDAAVEKI VAQLPVGIRL ERVADQPRAV TRAVDEFVKV LAEAVLIVMA
VSLLSLGFRT GVVVLVIIPV VLAITFMFMH LFDIGLHKIS LGALIIALGL LVDDAIIAVE
MMASKMEQGW GRVRAASYAW TSTAMPMLSG TLVTAAGFLP VALAASSVGE FTRSIFQVTV
TALLVSWIAA VLFVPYLGYY LLPDFSKRAG QPSRLARVVG RVWPALGRRM AERDLHAHEQ
HDEFAIYHTP FYNRLRALVN ACVRWRWGVI LLTVAIFVGA LFVFARFVPQ QFFPDSTRPE
LLVDLRLAEG ASHHATEVAV KRLEAFLDRQ EGIENYVAWV GTGSPRFYLP LDQQLAQTNF
AQLVILTAGL AEREALRAKL IHLFEDEPWP LRGIVVRLEN GPPVGFPVQY RVSGPDLAEL
HRRAQAVAEA MRANPHLSNV HMDWVEPSKV VRVAIDQDKA RLLGVSTQDL SSLLATSLQG
MTATQFREGN KTIALVLRGA ESERAHLSQL PDLALPVGGG RSVPLAQVAR LEHDFEPGVI
WRRNRIPTVT VRASLYDGTQ PAVVVGQLAP RMAELSAQLP LGYRLEVGGA VEESAKGSGS
VGAGMPIFVL TVLTVLMLQL KSFSRTIIVV LTAPLGLIGV AAFLLAFGKP FGFVALLGTI
ALSGMIMRNS VILVDQIRQD VEAGRMQWEA IVESAVRRFR PIMLTAAAAI LAMVPLSRST
FFGPMAVAIM GGLTVATVLT ILFLPALYAA WYRVKPADEE RAAADRSAAT ALE