| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3399 |
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| Symbol | |
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| ID | 7873890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3717949 |
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| End bp | 3719991 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643700338 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002890370 |
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| Protein GI | 237654056 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGACA ACCGCAAGCC GCCGGATCCC GACCCGCAGC CTTTTCCGAT GAGCCTCTCC
GACCCTCTCC CGCCCCCGGC GCGCCGGCGC TGGCTGCAGC AGCTGCCCTA CCTCAGCCTG
GCGCTCTTCC TCGCCGCGAT CGCCGCGCTG GTGTGGCTCA CCCGCGAGTA CGACGACGAG
GCCCAGCGCG CGACGCTGAT CAGCGACGTG CTGTGGATGG AGCAGAACCT GCGCTTCAAC
CTGGACCGCA ACGAGAACCA CCTGCAGGAG ATCGGCCCCG AGCTGCTCGC CACACCCACG
CTGTCGGCGC AGACCGAGGC TCGGCTCGCC AGCCTGCTGA CATCCGAGCG CGGCCTCGCG
CGCATCCTGT GGCTGTCGCC GGAAGGCGAA GTGCGCGGCG CGATGCCGCC GCTGGCTCCC
GCCCAGGCGG TGCACGACGC CTCCGCGGAT GCTGCCGCGG TGCCGGTCGA CGAATCCAGC
GTGCGGCTGG CACGCGCCAT CGGCCGCCCG GTGTATGGCC CCGCGCATCC GGCGCCCGGT
GGCACCCACC ACTTCGAGGT GCACGTGCCG GTGTGGTCGG ACGAGGCGCA GGTCGGCATG
GTGGTCGGCG TGTATGCGCT CTCGGACGTG GTGATGCGCG AGCTGCCGTG GTGGTTCTCC
GAGCGCTACC ACGTCGCCGT GCTCGACAGC GACGGACGCA CGATCGCCGC CAAGTCGAAA
GTCGCGCCGG TGTCGCCGCG GCTGTCCTAT TCGATGCCCT TCGATCCGCC CGGACACGGC
CTCACGCTGC AGATCTCCGC CTACCGCTCC GACCCGCGCT GGATCCCGGT GCTGCTCGGC
GCCTCGATCG TGCTGCTGGC CGGCATCATC GTGTGGAGCG TGATGCAACT GCGCCGCCAG
CTCGCACGCC GTCAGCAGGC CGAGGTGGCG CTGCGCGCCG AGTCGGTCTT CCGCAAGGCG
ATGGAGGACT CGATGCTGAC CGGCATGCGT GCGCGCGACC TCGAAGGCCG CCTCACCTAC
GTCAACTCCG CCTTTTGCCG CATGACCGGC TTCAGCGCGG ACGAGCTGCT CGGTCGCAAG
CCGCCGATGC CCTACTGGGA CCCGGAAAGG CTGGAGCAGA CCTTCGAGCT GCACCGCCAG
ATCATGACCA GCGGCAGCGC CAGCGAAGGC ACCGAGGTGC GCCTGCGGCG CAAGAACGGC
GAAACCCTCG ACGTCCTCGT CTTCGAGGCG CCGCTGATCG ACGCTTCCGG CCGCCACGCC
GGCTGGATGG GTTCGGTGCT CGACATCACC GAACAGAAGC GCGCGCGCGA ACAGGCCCGC
CAGCAGGAGG AGCGCCTGCA GCAGAGCTCG CGCCTGATCA CCATGGGCGA GATGGCGTCC
ACGCTCGCGC ACGAGCTCAA CCAGCCGCTC GCGGCGATCG CAAGCTACAC CACGGGCTGC
ATCAACCGCC TGCAGGACGA GGCGCCGCTC GACCGCAGCG AGCTGCTCGA CGTGCACCAG
CGCATCGCCC GTCAGGCCCA GCGCGCCGGC GAGATCATCC GCCGGGTGCA CGATTTCGTG
CGCCGATCCG AACCCAAGCG CGAGGCGCTC GACCTCGCCG CGGTGATCCG CGACGCCATC
GGCCTGATCG AGGCCGACGC GCGCAAGCGC GGCATGCGGA TCCGCAGCGA GCTCGCCGAC
GGCCTGCCGC AGGTGCCGGC GGACGCGGTG ATGATCGAGC AGATCGTCGT CAACCTGGTG
CGCAACGCGA TGGACTCGAT GCGCGACACC CCGCCAGCCG AGCGCGTCGT CGCCGTGCAC
ACCGCGCGCG AGGGCCGCTT CGTCACCGTC ACCGTCGCCG ACCGCGGCGC AGGCATTCCC
GCCGAAACCG CCGCGCGGCT ATTCGAGCCC TTCTTCACCA CCAAGCAGGA GGGCATGGGC
ATGGGACTCA ACATCTGCCG CTCGATCGCC GAGCTGCACC GCGGCCGCCT GGCCTTCGAA
TCGCGGCCGG GCGGCGGTAC CATCTTCACC CTTTCCCTCC CGGTGGACGC CGAGTTCGAA
TGA
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| Protein sequence | MRDNRKPPDP DPQPFPMSLS DPLPPPARRR WLQQLPYLSL ALFLAAIAAL VWLTREYDDE
AQRATLISDV LWMEQNLRFN LDRNENHLQE IGPELLATPT LSAQTEARLA SLLTSERGLA
RILWLSPEGE VRGAMPPLAP AQAVHDASAD AAAVPVDESS VRLARAIGRP VYGPAHPAPG
GTHHFEVHVP VWSDEAQVGM VVGVYALSDV VMRELPWWFS ERYHVAVLDS DGRTIAAKSK
VAPVSPRLSY SMPFDPPGHG LTLQISAYRS DPRWIPVLLG ASIVLLAGII VWSVMQLRRQ
LARRQQAEVA LRAESVFRKA MEDSMLTGMR ARDLEGRLTY VNSAFCRMTG FSADELLGRK
PPMPYWDPER LEQTFELHRQ IMTSGSASEG TEVRLRRKNG ETLDVLVFEA PLIDASGRHA
GWMGSVLDIT EQKRAREQAR QQEERLQQSS RLITMGEMAS TLAHELNQPL AAIASYTTGC
INRLQDEAPL DRSELLDVHQ RIARQAQRAG EIIRRVHDFV RRSEPKREAL DLAAVIRDAI
GLIEADARKR GMRIRSELAD GLPQVPADAV MIEQIVVNLV RNAMDSMRDT PPAERVVAVH
TAREGRFVTV TVADRGAGIP AETAARLFEP FFTTKQEGMG MGLNICRSIA ELHRGRLAFE
SRPGGGTIFT LSLPVDAEFE
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