Gene Tmz1t_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3395 
Symbol 
ID7873886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3713925 
End bp3714575 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID643700334 
ProductSNARE associated Golgi protein 
Protein accessionYP_002890366 
Protein GI237654052 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACC TCGCCTTCAC CGTCGATCTC GTGCTGCACG TCGATCGTCA CCTCGCCGAA 
CTGCTCGCGA ACTACGGCAA CTGGATCTAC GCGATCCTCT TCCTGATCGT CTTCTGCGAG
ACCGGTCTGG TCGTCACCCC CTTCCTGCCC GGCGATTCGC TGCTTTTCGT GGCCGGCGCG
CTGGCCGCCG GTGGCGGCAT GGACCCGGGT GTCCTGATCA CCGTGCTGTT CGTCGCAGCC
GTGGCCGGCG ACTCGCTGAA CTACACGATC GGCAACCGTT TCGGTGGGCG GATGCTGCAA
TGGCCCGACA GCCGCCTCTT CAACCGCCGG GCGCTCGAGC GCACACGCGA GTTCTATGAG
CGTCATGGCG GCAAGACCAT CATCATCGCC CGCTTCATGC CGATCATCCG CACCTTCGCG
CCCTTCGTCG CGGGCATGGC GGCGATGCGC TACCCGCGTT TCCTCTCCTT CAATGTGCTC
GGCGCTGCGC TCTGGGTCGG ACCTCTTGTC ATGGCGGGTT ACTGGTTTGG CAACCTGCCG
CTGATCAAGA ACAATCTCAC CCTGGTGATC TTCGGCATCA TCCTGCTGTC GCTGCTGCCG
CTTTTCGTCG GGTGGCTGCG TCATCGTGCA GCCTCGGTGG GCGCAGGATG A
 
Protein sequence
MEYLAFTVDL VLHVDRHLAE LLANYGNWIY AILFLIVFCE TGLVVTPFLP GDSLLFVAGA 
LAAGGGMDPG VLITVLFVAA VAGDSLNYTI GNRFGGRMLQ WPDSRLFNRR ALERTREFYE
RHGGKTIIIA RFMPIIRTFA PFVAGMAAMR YPRFLSFNVL GAALWVGPLV MAGYWFGNLP
LIKNNLTLVI FGIILLSLLP LFVGWLRHRA ASVGAG