Gene Tmz1t_3323 details

Gene Information

• Locus tag: Tmz1t_3323
• Symbol: rplF
• ID: 7874221
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 3636229
• End bp: 3636762
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643700257
• Product: 50S ribosomal protein L6
• Protein accession: YP_002890295
• Protein GI: 237653981
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00060748
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTG TAGCCAAGAA TCCGGTGGCG ATCCCGCAGG GCGTGGAAGT GATGATTTCC 
GACGCCGAGA TCGCAGTGAA GGGGCCTCTG GGTACCCTGC GCCAGCCGCT GAGCGGCGAG 
GTCAGCGTGG TCCGCGAAGG TGACGCGGTG GTGTGCAAGG CGCGTGAGGG CGCCGAGAAC 
GCCCGTGCCA TGTCCGGCAC CGTGCGCGCT CTGGTGAATA ACATGGTGAC GGGCGTGACC 
AAGGGCTTCG AGCGCAAGCT CACCCTGGTC GGCGTGGGTT ATCGCGCGCA GGCTCAGGGC 
GACAAGCTCA ACCTGTCGCT CGGTTTCTCT CACCCGGTGG TTCACCAGAT GCCGGAAGGC 
GTGAAGGTCG AGACGCCGAC CCAGACCGAG ATCGTGATCA GGGGTTCCGA CAAGCAGAAG 
GTCGGCCAGG TCGCTGCCGA GGTGCGTGCC TACCGCGCTC CCGAGCCCTA TAAGGGCAAG 
GGCGTCCGTT ACTCGGACGA GGTGGTGGTG CTCAAGGAAA CCAAGAAGAA GTAA 

 

Protein sequence

MSRVAKNPVA IPQGVEVMIS DAEIAVKGPL GTLRQPLSGE VSVVREGDAV VCKAREGAEN 
ARAMSGTVRA LVNNMVTGVT KGFERKLTLV GVGYRAQAQG DKLNLSLGFS HPVVHQMPEG 
VKVETPTQTE IVIRGSDKQK VGQVAAEVRA YRAPEPYKGK GVRYSDEVVV LKETKKK