| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3319 |
|---|
| Symbol | rplO |
|---|
| ID | 7874217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3634702 |
|---|
| End bp | 3635139 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643700253 |
|---|
| Product | 50S ribosomal protein L15 |
|---|
| Protein accession | YP_002890291 |
|---|
| Protein GI | 237653977 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0200] Ribosomal protein L15 |
|---|
| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0472148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA ATAGCATCAA GCCCGGTGAG GGTTCGAAGA AGGAAGCGCG CCGAGTCGGC
CGTGGCATCG GCAGCGGCCT GGGCAAGACC TGCGGCCGCG GCCACAAGGG TCAGAAGTCC
CGCGCCGGTG GCTTTCACAA GGTCGGCTTC GAGGGCGGTC AGATGCCGCT GCAGCGCCGT
CTGCCGAAGC GTGGATTCGT GTCGCTGACG CGAGCCCGCA ACGTCGAGGT ACGCCTGTCC
GAGCTCGACA AGCTGCCGGT CGATGAAGTC GATCTGCTGA CGCTGAAACA GGCCGGGGTG
ATCGCCGCCG ACGCGCTGTC GGCGAAGGTC GTGCTGTCCG GTTCGATCAG CCGCAAGGTG
GTTCTGCGCG GCGTCGGCGC CACCCAGGGT GCGAAGGCGG CGATCGAAGC CGCTGGCGGC
TCCGTGGCGG CCGAGTAA
|
|---|
| Protein sequence | MRLNSIKPGE GSKKEARRVG RGIGSGLGKT CGRGHKGQKS RAGGFHKVGF EGGQMPLQRR
LPKRGFVSLT RARNVEVRLS ELDKLPVDEV DLLTLKQAGV IAADALSAKV VLSGSISRKV
VLRGVGATQG AKAAIEAAGG SVAAE
|
|---|
| |