Gene Tmz1t_3312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3312 
Symbol 
ID7874210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp3630517 
End bp3631497 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content65% 
IMG OID643700246 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002890284 
Protein GI237653970 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.713226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGCA ATGCACTGCT GAAACCGCGC ATCATCGACG TCCAGAGCAC CTCGCCCGTT 
CAGGCGCGGG TGACGATGGA GCCGTTCGAG CGCGGTTTCG GTCACACGCT GGGGAATGCG 
CTTCGGCGCA TCCTCCTGTC GTCGCTTCCC GGCCATGCGC CGACCGAAGT GACGATCGAA 
GGGGTGCTTC ACGAGTACTC CACGCTCGAC GGCGTCCGCG AGGACATCGT CGATCTGCTG 
CTCAACTTGA AGGGCGTGGT GTTCAAGCTC AACGGGCGCA GCGAGGTCAC CGTCCGTCTC 
GCCAAGGCAG GCGAGGGTGT GGTGACTGCG GCCGACATCG AGGTCGGTCA CGACGTCGAG 
ATCATCAATC CCGACCACGT GATCGCCCAC CTCGCGCCGG GCGGCAAGCT CGACATGCAG 
ATCAAGGTCG AGGAAGGCCG CGGCTACGTG CCGGGCAATT CGCGTCCCGA GAACGCGGAG 
AGCAAGTCCA TCGGTCGCGT CGTGCTCGAT GCCTCCTTCG GTCCCGTGCG TCGCGTCAGC 
TACCTTGTCG AGAGCGCTCG CGTCGAGCAG CGTACCGACC TGGATCGCCT GATCATCGAC 
ATCGAGACCA ACGGTGCGGT CGACCCGGAA GAGGCGATTC GCTACGCCGC CCGGGTTCTC 
ATGGACCAGC TTTCCGTGTT CGCCGACCTC GAGGGGACGG CACCGGAGCG CGTCGAGGCG 
GCTTCGCCGA CCATCGACCC GGTGCTGCTG CGCCCGGTCG ACGATCTGGA GCTCACGGTG 
CGCTCGGCCA ACTGCCTGAA GGCCGAGAAC ATCTACTACA TCGGCGACCT GATCCAGCGT 
ACCGAGACCG AGCTGCTGAA GACCCCGAAC CTGGGCCGCA AGTCGCTCAA CGAGATCAAG 
GAAGTGTTGG CCTCCCGCGG GCTGACGCTT GGCATGAAAC TGGAAAACTG GCCGCCGGCC 
GGGCTTGAAA AGCTCGGTTG A
 
Protein sequence
MQSNALLKPR IIDVQSTSPV QARVTMEPFE RGFGHTLGNA LRRILLSSLP GHAPTEVTIE 
GVLHEYSTLD GVREDIVDLL LNLKGVVFKL NGRSEVTVRL AKAGEGVVTA ADIEVGHDVE 
IINPDHVIAH LAPGGKLDMQ IKVEEGRGYV PGNSRPENAE SKSIGRVVLD ASFGPVRRVS 
YLVESARVEQ RTDLDRLIID IETNGAVDPE EAIRYAARVL MDQLSVFADL EGTAPERVEA 
ASPTIDPVLL RPVDDLELTV RSANCLKAEN IYYIGDLIQR TETELLKTPN LGRKSLNEIK 
EVLASRGLTL GMKLENWPPA GLEKLG