Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3238 |
Symbol | |
ID | 7874459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 3539662 |
End bp | 3540303 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643700172 |
Product | endonuclease III |
Protein accession | YP_002890210 |
Protein GI | 237653896 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.27706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCGA TGAAGCGCGA GGCGATCCGC GAGTTTTTCC GCCGCCTGCA CGAGGCCGAA CCGCACCCGC AGACCGAACT CGAGTACGCG TCGCCCTATC AGTTGCTGGT CGCGGTGGTG CTGTCCGCCC AGGCCACCGA TCGCAGCGTC AATCTGGCCA CGCGCAAGCT GTTCGCGCTC GCCCCCACGC CCGAGGCCAT GGTCTCGCTC GGCGAGGAAG GCATCGCCGA GTGCATCAAG AGCATCGGCC TGTTCCGCAA CAAGGCGAAG AACACCCTCG CGCTGTCGCG CCTGCTGCTC GAACGCCACG GCGGCGAGGT GCCGGCGGTG CGCGAGGCGC TCGAAGCCCT GCCCGGCGTC GGCCGCAAGA CCGCCAACGT GGTGCTCAAC ACCGTCTTCC GCCAGCCGGC GATGGCGGTC GACACCCACA TCTTCCGCCT CGCCAACCGC ACCGGGCTGG CCCCGGGCAA GGATGTGCTG GAGGTCGAGA AGGCGCTGCT GCGGCGCGTG CCGAAGGACT ACCTGCTCGA CGCCCACCAC TGGCTGATCC TGCATGGCCG CTACGTGTGC ACCGCGCGCA AGCCCAAGTG CGGCGAGTGC GGCGTGCGCG ACCTGTGCCT GTGCCGCGAC AAGACCGACT GA
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Protein sequence | MAAMKREAIR EFFRRLHEAE PHPQTELEYA SPYQLLVAVV LSAQATDRSV NLATRKLFAL APTPEAMVSL GEEGIAECIK SIGLFRNKAK NTLALSRLLL ERHGGEVPAV REALEALPGV GRKTANVVLN TVFRQPAMAV DTHIFRLANR TGLAPGKDVL EVEKALLRRV PKDYLLDAHH WLILHGRYVC TARKPKCGEC GVRDLCLCRD KTD
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