| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3195 |
|---|
| Symbol | aceE |
|---|
| ID | 7874335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3478413 |
|---|
| End bp | 3481094 |
|---|
| Gene Length | 2682 bp |
|---|
| Protein Length | 893 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643700124 |
|---|
| Product | pyruvate dehydrogenase subunit E1 |
|---|
| Protein accession | YP_002890167 |
|---|
| Protein GI | 237653853 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
|---|
| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.226558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAA TCAGCACCGT TCTCCCGCAA ACCGACACGG ATGCGCAGGA AACGAAGGAA
TGGCTGGACG CGCTCGCCGC CGTCGTCGAA CACGAAGGCC CCGAGCGCGC CCACTACCTG
ATCGAGACCC TGATCGCCAC GGCGCGCCAG GAGGGGGTGA ACATCCCCTA CTCGGCCACG
ACCGAGTACA TCAACACGAT TCCGGCCGAG CGCCAGCCGC CCTACCCGGG CGATCCGGAT
CTGGAGATCA AGATCCACTC CTACATCCGC TGGAACGCGA TGGCGATGGT GGTGCGGGCG
AACAAGGACA CCAACGTGGG CGGTCACATC GCCTCCTTCG CCTCGGCGGC GGCGCTCTAC
GACGTGGGCT TCTCGCACTT CTGGCACGCG CCCTCCGAGG CGCACGACGG CGACCTGATC
TACTTCCAGG GCCACTCGGT GCCGGGCGTG TATGCGCGCG CGTTCATGCT GGGCCGTCTG
ACCGAAGAAC AGATGGACAG CTTCCGCCAG GAAGTGGGCG GCAAGGGCAT CTCGTCCTAC
CCGCACCCCT GGCTGATGCC CGACTTCTGG CAGTTCCCCA CCGTGTCGAT GGGCCTGGGT
CCGCTGTGCG CGATCTACTC GGCGCGCTTC ATGAAATACC TGGCCAGCCG CGGCCTGATC
GATCCGGCAC GCGCGCAGCA GCGCAAGGTG TGGGCCTTCC TGGGCGACGG CGAGACCGAC
GAGGTCGAAT CGCTGGGCGC GATCGGCATG GCCGGCCGCG AGGGCCTGGA CAACCTCGTC
TTCGTGATCA ACTGCAACCT GCAGCGCCTC GATGGTCCGG TGCGCGGCAA CGGCAAGATC
ATCCAGGAGC TCGAGTCCGA GTTCCGCGGC GCGGGCTGGA ACGTCATCAA GGTGATCTGG
GGCACGCACT GGGACGCGCT CTTCGCCCGC GACAAGAAGG GCATCCTCAA GCAGCGCATG
ATGGAGTTGT GCGACGGCGA GTATCAGACC TTCAAGGCCA AGGACGGCGC CTACGTGCGC
GAGCACTTCT TCAACACGCC CGAGCTGCGC GCGCTGGTGG CCGACTGGAC CGACGAGCAG
GTGTGGAACC TGAACCGCGG CGGCCACGAT CTCTTCAAGA TCTTCTCCGC CTACAAGGCC
GCCAACGAGC ACAAGGGGCA GCCCACGCTG ATCCTGGCCA AGACCATCAA GGGCTTCGGC
ATGGGCCAGG CCGGCGAGGC GATGAACATC TCGCACCAGC AGAAAAAGAT GGACGTCGAG
GCCATCCGCC GCTTCCGCGA CCGCTTCGGC CTGCCGGTGC CCGACGACCA GCTCGAGGCA
CTGCCCTACC TGAAGTTCGC CGAGGACTCT CCCGAGCACA AGTACCTGCT CAAGCACCGC
ATGGACCTGG GCGGCTTCCT GCCGCAGCGC CGGCGCAAGG CCGCCGCGCT CGAGATCCCG
GGCCTGGACA CCTTCGCCGC GCTGCTCAAG GCCTCGGGCG AGGGCCGCGA GCTGTCGACC
ACCATGGCGG TGGTGCGCAT CATGAACACG CTGTTGAAGG ACAAGCAGAT CGGCAAGCAT
GTCGTGCCGA TCGTCCCGGA CGAAAGCCGC ACCTTCGGCA TGGAGGGCAT GTTCCGCCAG
TACGGCATAT GGAACCAGCA AGGCCAGAAC TACGTGCCGG AAGACCATGA CCAGCTCATG
TTCTACAAGG AGAGCAAGAC CGGCCAGGTG CTGCAGGAAG GCATCAACGA GGCCGGCGCG
ATGGCCGACT GGATCGCCGC GGGCACCGCC TACAGCGTGC ACAACGTGCA GATGATCCCG
TTCTACATCT TCTATTCCAT GTTCGGCCTG CAGCGCACCA TGGACCTGTG CTGGGCGGCC
GCCGACCAGC GCACCCGCGG CTTCCTGATC GGGGGCACCG CCGGGCGCAC GACCCTGAAC
GGCGAAGGCC TGCAGCACGA GGACGGCCAC AGCCTGATCA TGGCCAACAT GATCCCCAAC
TGCATCAGCT ACGACCCGAC CTTCCAGTAC GAGGTCGCGG TGATCGTGCA GGACGGCCTG
CGCCGCATGT TCGCCGAGCA GGAGGACGTG TATTACTACA TCACGGTGAT GAACGAGAAC
TACGAACATC CCGAGATGCC GGTTGGCGCC GAGGCCGACA TCCTCAAAGG CCTGTACCTG
TTCCGCCAGG GCGGCCAGGC CAAGACCCCG CGCGTGCAGC TGATGGGTTC GGGCACGATC
TTCCGCGAGG TGATCGCCGC CGCCGAGCTG CTCAAGGCCG ACTGGGGCGT GGAGTCGGAC
ATCTGGGGCG CGCCCAGCTT CAACGAGCTG GCCCGCAACG GCCACGACGT CGAGCGCTGG
AACCTGCTGC ACCCGATGGA AGAGCCGCGA AAGACCCACG TGCAGCAGAA GCTCGCCGGC
TTCGCAGGCC CGGTCGTCGC CGCCACCGAC TACATCCGCA TGTTCCCCGA GCAGATCCGC
GCGCAGCTCG ACCGCACTTA CGTCACGCTG GGCACCGACG GCTTCGGCCG CTCCGACACC
CGCGAGCAGC TGCGCCACTT CTTCGAGGTG GATCGCCACT GGGTGACGCT GGCCGCGCTG
AAGGCGCTGG CCGACGAGGG CACGATCGGC CGCGACAAGG TCGCCGCGGC GATGGTCAAG
TACCAGCTCG ACCCGTCCAA ACCGAACCCG ATGTCGGTCT GA
|
|---|
| Protein sequence | MTGISTVLPQ TDTDAQETKE WLDALAAVVE HEGPERAHYL IETLIATARQ EGVNIPYSAT
TEYINTIPAE RQPPYPGDPD LEIKIHSYIR WNAMAMVVRA NKDTNVGGHI ASFASAAALY
DVGFSHFWHA PSEAHDGDLI YFQGHSVPGV YARAFMLGRL TEEQMDSFRQ EVGGKGISSY
PHPWLMPDFW QFPTVSMGLG PLCAIYSARF MKYLASRGLI DPARAQQRKV WAFLGDGETD
EVESLGAIGM AGREGLDNLV FVINCNLQRL DGPVRGNGKI IQELESEFRG AGWNVIKVIW
GTHWDALFAR DKKGILKQRM MELCDGEYQT FKAKDGAYVR EHFFNTPELR ALVADWTDEQ
VWNLNRGGHD LFKIFSAYKA ANEHKGQPTL ILAKTIKGFG MGQAGEAMNI SHQQKKMDVE
AIRRFRDRFG LPVPDDQLEA LPYLKFAEDS PEHKYLLKHR MDLGGFLPQR RRKAAALEIP
GLDTFAALLK ASGEGRELST TMAVVRIMNT LLKDKQIGKH VVPIVPDESR TFGMEGMFRQ
YGIWNQQGQN YVPEDHDQLM FYKESKTGQV LQEGINEAGA MADWIAAGTA YSVHNVQMIP
FYIFYSMFGL QRTMDLCWAA ADQRTRGFLI GGTAGRTTLN GEGLQHEDGH SLIMANMIPN
CISYDPTFQY EVAVIVQDGL RRMFAEQEDV YYYITVMNEN YEHPEMPVGA EADILKGLYL
FRQGGQAKTP RVQLMGSGTI FREVIAAAEL LKADWGVESD IWGAPSFNEL ARNGHDVERW
NLLHPMEEPR KTHVQQKLAG FAGPVVAATD YIRMFPEQIR AQLDRTYVTL GTDGFGRSDT
REQLRHFFEV DRHWVTLAAL KALADEGTIG RDKVAAAMVK YQLDPSKPNP MSV
|
|---|
| |